RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 USP13Q92995 863 aaPredicted RBP17.04■□□□□ 0.32
VPS37A-204ENST00000519381 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
VPS37A-204ENST00000519381 TMLHEQ9NVH6 421 aa17.04■□□□□ 0.32
VPS37A-204ENST00000519381 CCL26Q9Y258 94 aa17.04■□□□□ 0.32
VPS37A-204ENST00000519381 RALGAPA1Q6GYQ0 2036 aa17.04■□□□□ 0.32
VPS37A-204ENST00000519381 NCOR2Q9Y618 2525 aa17.04■□□□□ 0.32
VPS37A-204ENST00000519381 RPP40O75818 363 aaKnown RBP17.03■□□□□ 0.32
VPS37A-204ENST00000519381 USP17L7P0C7H9 530 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 HMGA1P17096 107 aaKnown RBP17.03■□□□□ 0.32
VPS37A-204ENST00000519381 CYP2F1P24903 491 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 ANXA13P27216 316 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 PDE6CP51160 858 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 PSMD2Q13200 908 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 MTF1Q14872 753 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 STK38Q15208 465 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 SURF1Q15526 300 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 IL31Q6EBC2 164 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 FAM160A2Q8N612 972 aaPredicted RBP17.03■□□□□ 0.32
VPS37A-204ENST00000519381 PDILTQ8N807 584 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 DNAJC19Q96DA6 116 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 CBWD1Q9BRT8 395 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 PDE11AQ9HCR9 933 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 DUS2Q9NX74 493 aaKnown RBP17.03■□□□□ 0.32
VPS37A-204ENST00000519381 GTF3C4Q9UKN8 822 aa17.03■□□□□ 0.32
VPS37A-204ENST00000519381 RNF40O75150 1001 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.32
VPS37A-204ENST00000519381 ARSAP15289 507 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 DRD1P21728 446 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 HOXA6P31267 233 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 CASP5P51878 434 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 FAM160A1Q05DH4 1040 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 RESTQ13127 1097 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 NR1H3Q13133 447 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 CUL4AQ13619 759 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 ZNF268Q14587 947 aaPredicted RBP17.02■□□□□ 0.32
VPS37A-204ENST00000519381 MAPRE1Q15691 268 aaKnown RBP17.02■□□□□ 0.32
VPS37A-204ENST00000519381 FBXO43Q4G163 708 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 TMEM196Q5HYL7 178 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 GAB3Q8WWW8 586 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
VPS37A-204ENST00000519381 ACDQ96AP0 544 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 TRMT2BQ96GJ1 504 aaKnown RBP17.02■□□□□ 0.32
VPS37A-204ENST00000519381 FUBP3Q96I24 572 aaKnown RBP eCLIP17.02■□□□□ 0.32
VPS37A-204ENST00000519381 P2RY13Q9BPV8 354 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 FAM83CQ9BQN1 747 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 STRA6Q9BX79 667 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 HPS4Q9NQG7 708 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 GDAP2Q9NXN4 497 aa17.02■□□□□ 0.32
VPS37A-204ENST00000519381 ZNF233A6NK53 670 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 TRDMT1O14717 391 aaKnown RBP17.01■□□□□ 0.31
VPS37A-204ENST00000519381 SLC30A4O14863 429 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 AXIN1O15169 862 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 NOL4O94818 638 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 SYT1P21579 422 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 TGM1P22735 817 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
VPS37A-204ENST00000519381 CFAP221Q4G0U5 840 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 PPM1JQ5JR12 505 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 WDR44Q5JSH3 913 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 LMBRD2Q68DH5 695 aaPredicted RBP17.01■□□□□ 0.31
VPS37A-204ENST00000519381 FSTL4Q6MZW2 842 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 FAM173BQ6P4H8 233 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 TMEM150AQ86TG1 271 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 CCDC26Q8TAB7 109 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 HPDLQ96IR7 371 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 MMS19Q96T76 1030 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 SYT15Q9BQS2 421 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
VPS37A-204ENST00000519381 C2orf42Q9NWW7 574 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 EHD2Q9NZN4 543 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
VPS37A-204ENST00000519381 DENND4CQ5VZ89 1909 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 OBSL1O75147 1896 aa17.01■□□□□ 0.31
VPS37A-204ENST00000519381 SPTBN2O15020 2390 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 EGFP01133 1207 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 GRIK1P39086 918 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 WNT7BP56706 349 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 ASIC1P78348 528 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 AMPD3Q01432 767 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 CYP27A1Q02318 531 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 CAMKK1Q8N5S9 505 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 ZSWIM2Q8NEG5 633 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 CD101Q93033 1021 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 HHIPQ96QV1 700 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 FNBP1Q96RU3 617 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 ECT2Q9H8V3 914 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 CDH9Q9ULB4 789 aa17■□□□□ 0.31
VPS37A-204ENST00000519381 CCDC163A0A0D9SF12 145 aa16.99■□□□□ 0.31
VPS37A-204ENST00000519381 NFATC1O95644 943 aa16.99■□□□□ 0.31
VPS37A-204ENST00000519381 GJA4P35212 333 aa16.99■□□□□ 0.31
VPS37A-204ENST00000519381 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
VPS37A-204ENST00000519381 USP4Q13107 963 aa16.99■□□□□ 0.31
VPS37A-204ENST00000519381 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
VPS37A-204ENST00000519381 ELF2Q15723 593 aa16.99■□□□□ 0.31
VPS37A-204ENST00000519381 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms