RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 STARD7Q9NQZ5 370 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 SYBUQ9NX95 663 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 KCTD5Q9NXV2 234 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 TESQ9UGI8 421 aaKnown RBP4.51□□□□□ -1.69
VPS13B-207ENST00000518569 PHTF1Q9UMS5 762 aa4.51□□□□□ -1.69
VPS13B-207ENST00000518569 MAST3O60307 1309 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 TMEM191CA6NGB0 347 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 TMEM233B4DJY2 109 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 EIF5BO60841 1220 aaKnown RBP4.5□□□□□ -1.69
VPS13B-207ENST00000518569 INMTO95050 263 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 MT-ND5P03915 603 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 ANXA2P07355 339 aaKnown RBP4.5□□□□□ -1.69
VPS13B-207ENST00000518569 PRIM2P49643 509 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 NEK3P51956 506 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 LILRA4P59901 499 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 HTRA4P83105 476 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-207ENST00000518569 PTPRRQ15256 657 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 SF3B3Q15393 1217 aaKnown RBP4.5□□□□□ -1.69
VPS13B-207ENST00000518569 INSCQ1MX18 579 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 PLA1AQ53H76 456 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 RBM20Q5T481 1227 aaKnown RBP4.5□□□□□ -1.69
VPS13B-207ENST00000518569 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 YAF2Q8IY57 180 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 SLC9A6Q92581 669 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 FAM136AQ96C01 138 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 PGBD1Q96JS3 809 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 TNIP3Q96KP6 325 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 SNX22Q96L94 193 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 Q96MF0 132 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 PPP1R9BQ96SB3 815 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 MYD88Q99836 296 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 MRIQ9BWK5 157 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 CHST8Q9H2A9 424 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 CYP4F11Q9HBI6 524 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 CASS4Q9NQ75 786 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 CORO2BQ9UQ03 480 aa4.5□□□□□ -1.69
VPS13B-207ENST00000518569 LOC102723971A0A1B0GUV8 181 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 RASA4BC9J798 803 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 F8W8V4 182 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 RASA4O43374 803 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 PARP1P09874 1014 aaKnown RBP4.49□□□□□ -1.69
VPS13B-207ENST00000518569 IL1R1P14778 569 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 PPP3CBP16298 524 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 ACVRL1P37023 503 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 DGKEP52429 567 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 E2F2Q14209 437 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 NBPF8Q3BBV2 869 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 KIAA0895LQ68EN5 471 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 Q6ZNX1 250 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 SAMD3Q8N6K7 520 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 RNF152Q8N8N0 203 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 ATP11CQ8NB49 1132 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 B3GALNT2Q8NCR0 500 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 SLC30A5Q8TAD4 765 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 BRI3BPQ8WY22 251 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 LPIN2Q92539 896 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 LARP4BQ92615 738 aaKnown RBP4.49□□□□□ -1.69
VPS13B-207ENST00000518569 GJA10Q969M2 543 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 SLC39A13Q96H72 371 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 ELAC2Q9BQ52 826 aaKnown RBP4.49□□□□□ -1.69
VPS13B-207ENST00000518569 CHST12Q9NRB3 414 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 SLC52A1Q9NWF4 448 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 NDRG4Q9ULP0 352 aaKnown RBP4.49□□□□□ -1.69
VPS13B-207ENST00000518569 CAPN11Q9UMQ6 739 aa4.49□□□□□ -1.69
VPS13B-207ENST00000518569 GRID2IPA4D2P6 1211 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 POM121BA6NF01 834 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 CYR61O00622 381 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 AREL1O15033 823 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 KPNA5O15131 536 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 MPPED1O15442 326 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 PEX1O43933 1283 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 RASSF9O75901 435 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 ESRRBO95718 433 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 IFIT2P09913 472 aaKnown RBP4.48□□□□□ -1.69
VPS13B-207ENST00000518569 TSHRP16473 764 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 BTF3P20290 206 aaKnown RBP4.48□□□□□ -1.69
VPS13B-207ENST00000518569 KCNA3P22001 575 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 IL1R2P27930 398 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 FOLR3P41439 243 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 HTR3AP46098 478 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 STT3AP46977 705 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 CARSP49589 748 aaKnown RBP4.48□□□□□ -1.69
VPS13B-207ENST00000518569 HNRNPMP52272 730 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13B-207ENST00000518569 KRT17Q04695 432 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 MYO1EQ12965 1108 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 LONRF1Q17RB8 773 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 SYCP2LQ5T4T6 812 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 VPS53Q5VIR6 699 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 ZDHHC24Q6UX98 284 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 Q6YL49 198 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 Q6ZPA2 131 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 UNC13DQ70J99 1090 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 DTX2Q86UW9 622 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13B-207ENST00000518569 SUPT20HQ8NEM7 779 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 SMCR8Q8TEV9 937 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-207ENST00000518569 RAPGEF4Q8WZA2 1011 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 AIFM2Q9BRQ8 373 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 ALG8Q9BVK2 526 aa4.48□□□□□ -1.69
VPS13B-207ENST00000518569 STK31Q9BXU1 1019 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms