RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ANP32AP39687 249 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 UBA7P41226 1012 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TECP42680 631 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RAD52P43351 418 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TOB1P50616 345 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 PMS1P54277 932 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 CCL23P55773 120 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 MPP1Q00013 466 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RHDQ02161 417 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PPFIA1Q13136 1202 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 GTF2H3Q13889 308 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 LLGL1Q15334 1064 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZRSR1Q15695 479 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 TMEM266Q2M3C6 531 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 INAVAQ3KP66 663 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 B3GNT9Q6UX72 402 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TTLL10Q6ZVT0 673 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PLPPR4Q7Z2D5 763 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ANKRD33Q7Z3H0 272 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 BRAPQ7Z569 592 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 MYLK4Q86YV6 388 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 HID1Q8IV36 788 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CCDC60Q8IWA6 550 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 AHI1Q8N157 1196 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 MYCT1Q8N699 235 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 NKAIN3Q8N8D7 197 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZNF513Q8N8E2 541 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 NAXEQ8NCW5 288 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 FAM13CQ8NE31 585 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 FLCNQ8NFG4 579 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 IPCEF1Q8WWN9 437 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 USP7Q93009 1102 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ATP6V0A1Q93050 837 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TRIM43Q96BQ3 446 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 MBOAT7Q96N66 472 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TOX2Q96NM4 488 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 FANCD2OSQ96PS1 177 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TBCBQ99426 244 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 APOL5Q9BWW9 433 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TMEM60Q9H2L4 133 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 HIPK3Q9H422 1215 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZSCAN16Q9H4T2 348 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 TRIM39Q9HCM9 518 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 KCNMB3Q9NPA1 279 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 NRBP2Q9NSY0 501 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CEP131Q9UPN4 1083 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 MTMR6Q9Y217 621 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 BRCA2P51587 3418 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 DOCK3Q8IZD9 2030 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 NRCAMQ92823 1304 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 SMCHD1A6NHR9 2005 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 A0A0A0MRY4 1105 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TRBV23-1A0A0A0MS06 115 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 A0A1B0GVC2 190 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PABPN1LA6NDY0 278 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 RRN3P2A6NIE6 340 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 HAS3O00219 553 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 GSC2O15499 205 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 HBP1O60381 514 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TMCC2O75069 709 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 MED26O95402 600 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TIMP1P01033 207 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 JMJD7P0C870 316 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZSCAN22P10073 491 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 DRD2P14416 443 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 INSRRP14616 1297 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 BPIP17213 487 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 POU3F2P20265 443 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 KLRC1P26715 233 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CYP2C18P33260 490 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 KRT20P35900 424 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 GRIK1P39086 918 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 THPOP40225 353 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 QARSP47897 775 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 SLC26A2P50443 739 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 YARSP54577 528 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 PSMC5P62195 406 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ROR1Q01973 937 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PRKCEQ02156 737 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CYP4A11Q02928 519 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RESTQ13127 1097 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PPP2R5CQ13362 524 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ORC2Q13416 577 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 BFSP2Q13515 415 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 CTTNQ14247 550 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZNF267Q14586 743 aaPredicted RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 SLC9A5Q14940 896 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 SNX17Q15036 470 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 PLCB4Q15147 1175 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 EPHA7Q15375 998 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZNF124Q15973 351 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 UGCGQ16739 394 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 SLC45A4Q5BKX6 768 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZC3H12BQ5HYM0 836 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 ZCCHC8Q6NZY4 707 aaKnown RBP3.02□□□□□ -1.93
SKP1-204ENST00000517691 FAM173BQ6P4H8 233 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 RPAINQ86UA6 219 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 TTC30AQ86WT1 665 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 FAM126BQ8IXS8 530 aa3.02□□□□□ -1.93
SKP1-204ENST00000517691 LMNTD2Q8IXW0 634 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms