RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 TSPY1Q01534 308 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 USP4Q13107 963 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 ZNF77Q15935 545 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 NFE2Q16621 373 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 NAIF1Q69YI7 327 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 ANO7Q6IWH7 933 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 KIAA1211LQ6NV74 962 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 KCNK18Q7Z418 384 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 SYT2Q8N9I0 419 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 RIN3Q8TB24 985 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 USP33Q8TEY7 942 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 PIGKQ92643 395 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 TRMT2BQ96GJ1 504 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 SPACA7Q96KW9 195 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 PYM1Q9BRP8 204 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 MSTO1Q9BUK6 570 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 CCSER1Q9C0I3 900 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 MAGED2Q9UNF1 606 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 INVSQ9Y283 1065 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 C2CD2Q9Y426 696 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 ANAPC1Q9H1A4 1944 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 A0A0B4J269 797 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 UPK3BL1B0FP48 263 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 UPK3BL2E5RIL1 263 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 NFATC1O95644 943 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 NFICP08651 508 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 BCKDHBP21953 392 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 HOXD12P35452 270 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 PDE6CP51160 858 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 RPL10AP62906 217 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 NBR1Q14596 966 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 EML3Q32P44 896 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 SV2CQ496J9 727 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 HYIQ5T013 277 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 LPCAT2Q7L5N7 544 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 FSIP1Q8NA03 581 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 MDGA1Q8NFP4 955 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 LEO1Q8WVC0 666 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 ZNF560Q96MR9 790 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 ASB7Q9H672 318 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 ABCB6Q9NP58 842 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 ODF2LQ9ULJ1 636 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 FREM2Q5SZK8 3169 aa12.35□□□□□ -0.43
TRAPPC9-203ENST00000517667 TAF4O00268 1085 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 MAP3K13O43283 966 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 NOL4O94818 638 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 TCF3P15923 654 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 MAPK8P45983 427 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 CDR1P51861 262 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 SIM1P81133 766 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 BYSLQ13895 437 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 ZRSR1Q15695 479 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 CRY1Q16526 586 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 C2orf27AQ580R0 203 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 WSCD1Q658N2 575 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 SLC23A3Q6PIS1 610 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 EFCAB13Q8IY85 973 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 WHAMMQ8TF30 809 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 CDK5RAP3Q96JB5 506 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 MYRFLQ96LU7 910 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 PI4K2AQ9BTU6 479 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 KLK13Q9UKR3 277 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 WNT6Q9Y6F9 365 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 IGSF10Q6WRI0 2623 aa12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 SMG1Q96Q15 3661 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-203ENST00000517667 ADAMTS20P59510 1910 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 CEP192Q8TEP8 1941 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 KPNA7A9QM74 516 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 K7ENM7 598 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 K7EQS6 105 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 TADA3O75528 432 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 ENGP17813 658 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 PNPLA4P41247 253 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 PI4KAP42356 2102 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 NEK4P51957 841 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 ATXN3P54252 364 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 SEC13P55735 322 aa12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 MRPS21P82921 87 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-203ENST00000517667 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms