RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NRBF2Q96F24 287 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PGM2Q96G03 612 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SAMD11Q96NU1 681 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF317Q96PQ6 595 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PPP1R16BQ96T49 567 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MRPL1Q9BYD6 325 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CRNKL1Q9BZJ0 848 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PDGFDQ9GZP0 370 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 DPH5Q9H2P9 285 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 THAP9Q9H5L6 903 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SH2D4AQ9H788 454 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CNNM2Q9H8M5 875 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC177Q9NQR7 707 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 C8orf4Q9NR00 106 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SAR1AQ9NR31 198 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 AASDHPPTQ9NRN7 309 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 INTS9Q9NV88 658 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ETNK2Q9NVF9 386 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 THAP1Q9NVV9 213 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAP3K20Q9NYL2 800 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 STMN3Q9NZ72 180 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 KIF17Q9P2E2 1029 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 STX18Q9P2W9 335 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 EPS15L1Q9UBC2 864 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 DBF4Q9UBU7 674 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 VANGL2Q9ULK5 521 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PADI4Q9UM07 663 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ERVK-11Q9UQG0 969 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PLAAQ9Y263 795 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 COQ6Q9Y2Z9 468 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 HYOU1Q9Y4L1 999 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 TELO2Q9Y4R8 837 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PCDHGB3Q9Y5G1 929 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 EPN1Q9Y6I3 576 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 KIAA0586Q9BVV6 1533 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADGRL2O95490 1459 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ATP7BP35670 1465 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ABCC5O15440 1437 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MROH7-TTC4A0A0A0MT08 1334 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZMYM6O95789 1325 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 UMODL1Q5DID0 1318 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 hCG_2014768A0A024R1R8 64 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LOC105371267A0A1B0GV96 52 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 FUOMA2VDF0 154 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM221AA4D161 298 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 F8W8V4 182 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CES2O00748 559 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CPLX1O14810 134 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 OPHN1O60890 802 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TRMUO75648 421 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 RNASEH2AO75792 299 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 UBOX5O94941 541 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 GJB6O95452 261 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CRYZL1O95825 349 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CHEK2O96017 543 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 AGTP01019 485 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 S100BP04271 92 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LDHCP07864 332 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ENO2P09104 434 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 C1QTNF9P0C862 333 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 PABPC1P11940 636 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 IDEP14735 1019 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 POLR2CP19387 275 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 PSMA3P25788 255 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 IFNA8P32881 189 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 NUDT1P36639 197 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 EIF4A3P38919 411 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 GPD2P43304 727 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAPKAPK2P49137 400 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TUFMP49411 452 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAP3K7CLP57077 242 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 AP2B1P63010 937 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 KCNJ2P63252 427 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TFAP4Q01664 338 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 DSG1Q02413 1049 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 GRIN1Q05586 938 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 FCHO2Q0JRZ9 810 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 UBE4AQ14139 1066 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 SQLEQ14534 574 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 PLS1Q14651 629 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LPIN1Q14693 890 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 STK38Q15208 465 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CYTH1Q15438 398 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 SPA17Q15506 151 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF829Q3KNS6 432 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TMEM67Q5HYA8 995 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 C10orf76Q5T2E6 689 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 TMEM63BQ5T3F8 832 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LETMD1Q6P1Q0 360 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 DUS1LQ6P1R4 473 aaKnown RBP5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 FBXL19Q6PCT2 694 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 KLHL35Q6PF15 583 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 BLOC1S2Q6QNY1 142 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 BTNL9Q6UXG8 535 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 C4orf22Q6V702 233 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 IDO2Q6ZQW0 420 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRRC74BQ6ZQY2 392 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 ERMP1Q7Z2K6 904 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 THAP5Q7Z6K1 395 aa5.05□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDH24Q86UP0 819 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms