RNA–Protein interactions for RNA: ENST00000517467.1

CLSPN-205, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 553 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-205ENST00000517467 GAS2L3Q86XJ1 694 aa6.3□□□□□ -1.4
CLSPN-205ENST00000517467 SIMC1Q8NDZ2 872 aa6.3□□□□□ -1.4
CLSPN-205ENST00000517467 NMD3Q96D46 503 aaKnown RBP6.3□□□□□ -1.4
CLSPN-205ENST00000517467 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
CLSPN-205ENST00000517467 ZNF518BQ9C0D4 1074 aa6.3□□□□□ -1.4
CLSPN-205ENST00000517467 SERHLQ9NQF3 203 aa6.3□□□□□ -1.4
CLSPN-205ENST00000517467 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
CLSPN-205ENST00000517467 EIF4G1Q04637 1599 aaKnown RBP6.3□□□□□ -1.4
CLSPN-205ENST00000517467 TRIM43BA6NCK2 446 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 MYO1CO00159 1063 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 MGST3O14880 152 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
CLSPN-205ENST00000517467 PEX2P28328 305 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 CLK3P49761 638 aaKnown RBP6.29□□□□□ -1.4
CLSPN-205ENST00000517467 RAB32Q13637 225 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 ICE2Q659A1 982 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 KAZNQ674X7 775 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 DTX2Q86UW9 622 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 TFAP2BQ92481 460 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 RFKQ969G6 155 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
CLSPN-205ENST00000517467 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
CLSPN-205ENST00000517467 SHOC2Q9UQ13 582 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 PAXBP1Q9Y5B6 917 aa6.29□□□□□ -1.4
CLSPN-205ENST00000517467 CCDC151A5D8V7 595 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 TMEM233B4DJY2 109 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 KIF3BO15066 747 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 RHOP08100 348 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 CHRM2P08172 466 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 ELFN1P0C7U0 828 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 LRPAP1P30533 357 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 GRIA3P42263 894 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 MAPK10P53779 464 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 ZIK1Q3SY52 487 aaPredicted RBP6.28□□□□□ -1.4
CLSPN-205ENST00000517467 ZNF280BQ86YH2 543 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 TTC17Q96AE7 1141 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 FKBP10Q96AY3 582 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 ALG8Q9BVK2 526 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 A1CFQ9NQ94 594 aaKnown RBP6.28□□□□□ -1.4
CLSPN-205ENST00000517467 COL20A1Q9P218 1284 aa6.28□□□□□ -1.4
CLSPN-205ENST00000517467 NDRG4Q9ULP0 352 aaKnown RBP6.28□□□□□ -1.4
CLSPN-205ENST00000517467 COL11A2P13942 1736 aaPredicted RBP6.28□□□□□ -1.4
CLSPN-205ENST00000517467 POLR2AP24928 1970 aaKnown RBP6.27□□□□□ -1.4
CLSPN-205ENST00000517467 KIAA0355O15063 1070 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 PPM1DO15297 605 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 BRAFP15056 766 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 INHBEP58166 350 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 ERCC6LQ2NKX8 1250 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 ZNF362Q5T0B9 420 aaPredicted RBP6.27□□□□□ -1.41
CLSPN-205ENST00000517467 DCAF12L1Q5VU92 463 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
CLSPN-205ENST00000517467 KRT78Q8N1N4 520 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 OR56A3Q8NH54 315 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 CAGE1Q8TC20 777 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 PBKQ96KB5 322 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 MS4A7Q9GZW8 240 aaPredicted RBP6.27□□□□□ -1.41
CLSPN-205ENST00000517467 PRDM13Q9H4Q3 707 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 KIAA1586Q9HCI6 787 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 XPNPEP3Q9NQH7 507 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 SACM1LQ9NTJ5 587 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 GEMIN8Q9NWZ8 242 aaKnown RBP6.27□□□□□ -1.41
CLSPN-205ENST00000517467 DKK3Q9UBP4 350 aa6.27□□□□□ -1.41
CLSPN-205ENST00000517467 AFF4Q9UHB7 1163 aaKnown RBP6.27□□□□□ -1.41
CLSPN-205ENST00000517467 hCG_1984214I3L0E3 225 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 MGEA5O60502 916 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 PDHA1P08559 390 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 BMP5P22003 454 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 DGKEP52429 567 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 CACNA2D1P54289 1103 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 SP2Q02086 613 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 MYO1EQ12965 1108 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 TBCCQ15814 346 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 SMN1Q16637 294 aaKnown RBP6.26□□□□□ -1.41
CLSPN-205ENST00000517467 SLC44A4Q53GD3 710 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 ARHGAP40Q5TG30 622 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 SESTD1Q86VW0 696 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 FAM98AQ8NCA5 519 aaKnown RBP6.26□□□□□ -1.41
CLSPN-205ENST00000517467 MSLNLQ96KJ4 702 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 BTBD1Q9H0C5 482 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 EHD3Q9NZN3 535 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 C11orf21Q9P2W6 132 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 SERTAD3Q9UJW9 196 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 MRPS17Q9Y2R5 130 aaKnown RBP6.26□□□□□ -1.41
CLSPN-205ENST00000517467 PCDHGB6Q9Y5F9 930 aa6.26□□□□□ -1.41
CLSPN-205ENST00000517467 MBD3L4A6NDZ8 208 aaPredicted RBP6.25□□□□□ -1.41
CLSPN-205ENST00000517467 MBD3L3A6NE82 208 aaPredicted RBP6.25□□□□□ -1.41
CLSPN-205ENST00000517467 ZAR1LA6NP61 321 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 PYCARD-AS1I3L0S3 204 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 CSF1RP07333 972 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 RPL17P18621 184 aaKnown RBP6.25□□□□□ -1.41
CLSPN-205ENST00000517467 KCNA3P22001 575 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 PCSK6P29122 969 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 E2F2Q14209 437 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 HLTFQ14527 1009 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLSPN-205ENST00000517467 MGAT5BQ3V5L5 792 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 C3orf38Q5JPI3 329 aa6.25□□□□□ -1.41
CLSPN-205ENST00000517467 RGS7BPQ6MZT1 257 aaPredicted RBP6.25□□□□□ -1.41
CLSPN-205ENST00000517467 ZDHHC24Q6UX98 284 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms