RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 WDR60Q8WVS4 1066 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 ASPSCR1Q9BZE9 553 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC13A1Q9BZW2 595 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 MRGBPQ9NV56 204 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 KIAA1257Q9ULG3 409 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 AKAP10O43572 662 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 EXTL3O43909 919 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 RASSF9O75901 435 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 DLGAP3O95886 979 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 MOCS2O96007 188 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 CASP1P29466 404 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 PPIDQ08752 370 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 NFIAQ12857 509 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 MTA1Q13330 715 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TBCCQ15814 346 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TDRD10Q5VZ19 366 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TTC33Q6PID6 262 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 FLCNQ8NFG4 579 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 PDCD6IPQ8WUM4 868 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 FOPNLQ96NB1 174 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZNF197O14709 1029 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 AMHP03971 560 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TARSP26639 723 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 HSD17B3P37058 310 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC1A1P43005 524 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 CCNYL1Q8N7R7 359 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 MDM1Q8TC05 714 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 CDH2P19022 906 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 ST13P50502 369 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 STX3Q13277 289 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 MICU2Q8IYU8 434 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 FUKQ8N0W3 1084 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRAPPC9Q96Q05 1148 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 NWD1Q149M9 1564 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 GOLGA8MH3BSY2 632 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 NAMPTP43490 491 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 VCPP55072 806 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 DCTN2Q13561 401 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 MDH1BQ5I0G3 518 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 HDDC2Q7Z4H3 204 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRIM51Q9BSJ1 452 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 KIF17Q9P2E2 1029 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
PCDHGA6-201ENST00000517434 PHF2O75151 1096 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 HMOX2P30519 316 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 SP3Q02447 781 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 DDR1Q08345 913 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 SHC4Q6S5L8 630 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 FRA10AC1Q70Z53 315 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 DDX53Q86TM3 631 aaKnown RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 CYGBQ8WWM9 190 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 DCUN1D1Q96GG9 259 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZFYVE19Q96K21 471 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 CNTNAP5Q8WYK1 1306 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 HNRNPRO43390 633 aaKnown RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 UBOX5O94941 541 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 GARTP22102 1010 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 BLVRAP53004 296 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 PLD1Q13393 1074 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 PTPAQ15257 358 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 USP13Q92995 863 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 MPP4Q96JB8 637 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 RAD21L1Q9H4I0 556 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 PSMC3IPQ9P2W1 217 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 OGTO15294 1046 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 ENO3P13929 434 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 SREBF1P36956 1147 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 TPI1P60174 286 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 SNRNP35Q16560 246 aaKnown RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC18A3Q16572 532 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 COG4Q9H9E3 785 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 ENTPD7Q9NQZ7 604 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 FBXO28Q9NVF7 368 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATAD3AQ9NVI7 634 aa12.75□□□□□ -0.37
PCDHGA6-201ENST00000517434 PIK3R2O00459 728 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 KPNA4O00629 521 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms