RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 MAP9Q49MG5 647 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SEL1L2Q5TEA6 688 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PMF1Q6P1K2 205 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DNAJC24Q6P3W2 148 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DCUN1D2Q6PH85 259 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CD300LGQ6UXG3 332 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 FAM43BQ6ZT52 329 aaPredicted RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 HDXQ7Z353 690 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 OSTM1Q86WC4 334 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TTC30AQ86WT1 665 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 ECHDC2Q86YB7 292 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SLC13A5Q86YT5 568 aaPredicted RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 RHOT1Q8IXI2 618 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 KLHL7Q8IXQ5 586 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 IFT20Q8IY31 132 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 RCOR2Q8IZ40 523 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TMEM86AQ8N2M4 240 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 ARFGAP1Q8N6T3 406 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PRELID2Q8N945 189 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 C12orf50Q8NA57 414 aaPredicted RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 ANKRD52Q8NB46 1076 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 APPL2Q8NEU8 664 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 OR6B3Q8NGW1 331 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 EXD1Q8NHP7 514 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CCDC26Q8TAB7 109 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 UBA3Q8TBC4 463 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 AENQ8WTP8 325 aaKnown RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 KHSRPQ92945 711 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 LPPQ93052 612 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SENP8Q96LD8 212 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 MCEEQ96PE7 176 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 ADAM2Q99965 735 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PLVAPQ9BX97 442 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 UBXN6Q9BZV1 441 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 MIS12Q9H081 205 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DPEP3Q9H4B8 488 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 LRRC19Q9H756 370 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 GOLGA2P5Q9HBQ8 144 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 UBN1Q9NPG3 1134 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CYLDQ9NQC7 956 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PAK6Q9NQU5 681 aaPredicted RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 STARD7Q9NQZ5 370 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 RGS18Q9NS28 235 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 RNF216Q9NWF9 866 aaPredicted RBP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PCYOX1Q9UHG3 505 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TSPAN16Q9UKR8 245 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PTPN22Q9Y2R2 807 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PTCH2Q9Y6C5 1203 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TSC2P49815 1807 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 NLRC5Q86WI3 1866 aa5.73□□□□□ -1.49
SCARNA20.4-201ENST00000516969 MICAL3Q7RTP6 2002 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 NUP205Q92621 2012 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 VWA8A3KMH1 1905 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 MYO18AQ92614 2054 aaKnown RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 GOLGA6L10A0A0M3HER8 536 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 FAM187AA6NFU0 413 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 C3orf70A6NLC5 250 aaPredicted RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 C2CD4BA6NLJ0 364 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 A8MXQ7 604 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 E5RJQ4 531 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TULP2O00295 520 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DNM1LO00429 736 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PODXLO00592 558 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CYB561D2O14569 222 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 HCRTO43612 131 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PHF2O75151 1096 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 HEXIM1O94992 359 aaKnown RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PDGFRBP09619 1106 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TCF4P15884 667 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PTPN1P18031 435 aaKnown RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PAX3P23760 479 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CHRNA3P32297 505 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PTPN7P35236 360 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SCNN1AP37088 669 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PLA2G4AP47712 749 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 LHX1P48742 406 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CARSP49589 748 aaKnown RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SCNN1GP51170 649 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 CLCNKBP51801 687 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 ZNF143P52747 638 aaPredicted RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 BCAT1P54687 386 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SNX16P57768 344 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 COPS2P61201 443 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 GUCY2DQ02846 1103 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 SLC25A11Q02978 314 aaKnown RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 PDE4CQ08493 712 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 KLF1Q13351 362 aaPredicted RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 NNTQ13423 1086 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DHX34Q14147 1143 aaKnown RBP5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 GPNMBQ14956 572 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TRADDQ15628 312 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 TAZQ16635 292 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 GOLGA7BQ2TAP0 167 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 KIAA0319Q5VV43 1072 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DAB2IPQ5VWQ8 1189 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 WSCD1Q658N2 575 aa5.72□□□□□ -1.49
SCARNA20.4-201ENST00000516969 DUPD1Q68J44 220 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms