RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 ARL14EPQ8N8R7 260 aaPredicted RBP8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 GAB3Q8WWW8 586 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 ZNF516Q92618 1163 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 E2F7Q96AV8 911 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 CDK5RAP3Q96JB5 506 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 MYRFLQ96LU7 910 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 USP28Q96RU2 1077 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 OXCT2Q9BYC2 517 aaPredicted RBP8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TRIM9Q9C026 710 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 ZDHHC4Q9NPG8 344 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TDP1Q9NUW8 608 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 GMEB2Q9UKD1 530 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 MAGED2Q9UNF1 606 aaPredicted RBP8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 MYH11P35749 1972 aa8.91□□□□□ -0.98
SCARNA20.3-201ENST00000516913 SPAG17Q6Q759 2223 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 PATE3B3GLJ2 98 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TGFB1I1O43294 461 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 PRPF40AO75400 957 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 EPN2O95208 641 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 PMLP29590 882 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TUFMP49411 452 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 NRLP54845 237 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 PSMC1P62191 440 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TFAMQ00059 246 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 CEBPZQ03701 1054 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 USP4Q13107 963 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 E2F4Q16254 413 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 INTS6LQ5JSJ4 861 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 L1TD1Q5T7N2 865 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 EMC10Q5UCC4 262 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TMEM92Q6UXU6 159 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 C12orf40Q86WS4 652 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 CD302Q8IX05 232 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 NETO1Q8TDF5 533 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 POMGNT1Q8WZA1 660 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 TSPAN18Q96SJ8 248 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 MRPL45Q9BRJ2 306 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 IER2Q9BTL4 223 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 DPEP3Q9H4B8 488 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 ECT2Q9H8V3 914 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 GDAP2Q9NXN4 497 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 DDX43Q9NXZ2 648 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 PCDHB5Q9Y5E4 795 aa8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 SRPRBQ9Y5M8 271 aaKnown RBP8.9□□□□□ -0.98
SCARNA20.3-201ENST00000516913 NUP210Q8TEM1 1887 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ASCC3Q8N3C0 2202 aaKnown RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 H3BQV1 296 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 TRIM24O15164 1050 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SLC26A4O43511 780 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 LRP3O75074 770 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 NEFLP07196 543 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ZNF806P0C7X5 589 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SYT1P21579 422 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 CDC25CP30307 473 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 LRRC32Q14392 662 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 STPG1Q5TH74 334 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 PAQR9Q6ZVX9 377 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 EPM2AIP1Q7L775 607 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ITIH5Q86UX2 942 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 PHTF2Q8N3S3 785 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SYNPOQ8N3V7 929 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 CSGALNACT2Q8N6G5 542 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 GPR161Q8N6U8 529 aaKnown RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 RPLP0P6Q8NHW5 317 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SPPL2BQ8TCT7 592 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SH3RF2Q8TEC5 729 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 CALML4Q96GE6 196 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ZC3H10Q96K80 434 aaKnown RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ZFRQ96KR1 1074 aaKnown RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ACBD6Q9BR61 282 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 TMEM121BQ9BXQ6 578 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 INTS13Q9NVM9 706 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SMC3Q9UQE7 1217 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 MTMR6Q9Y217 621 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SNX9Q9Y5X1 595 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 DENND4CQ5VZ89 1909 aa8.89□□□□□ -0.99
SCARNA20.3-201ENST00000516913 OBSL1O75147 1896 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 H0YCG3 227 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 DPYSL4O14531 572 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 CDX4O14627 284 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 TBCAO75347 108 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 RPP40O75818 363 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 KRT18P05783 430 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 PDGFRBP09619 1106 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 HOXB3P14651 431 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 SPINK2P20155 84 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 BDNFP23560 247 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 CNR2P34972 360 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 POU5F1Q01860 360 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 EHHADHQ08426 723 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 BFSP1Q12934 665 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 MTF1Q14872 753 aa8.88□□□□□ -0.99
SCARNA20.3-201ENST00000516913 KYAT1Q16773 422 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms