RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 PPP1R2P1Q96PQ5 205 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRAPPC9Q96Q05 1148 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 UIMC1Q96RL1 719 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TSPAN18Q96SJ8 248 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCNK16Q96T55 309 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RMDN3Q96TC7 470 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ADPGKQ9BRR6 497 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM213AQ9BRX8 229 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HAUS8Q9BT25 410 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RUSC1Q9BVN2 902 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TBC1D10AQ9BXI6 508 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HEMGNQ9BXL5 484 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 OSBPL1AQ9BXW6 950 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MRPL4Q9BYD3 311 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TXLNGYQ9BZA5 131 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 INO80BQ9C086 356 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM117Q9H0C3 514 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 DEFB129Q9H1M3 183 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 C1orf21Q9H246 121 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LHX5Q9H2C1 402 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRMDAQ9H2I8 198 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 UNC45AQ9H3U1 944 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 DHX33Q9H6R0 707 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TDRD3Q9H7E2 651 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RPF1Q9H9Y2 349 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RNPEPL1Q9HAU8 725 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP3A43Q9HB55 503 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 EML4Q9HC35 981 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PCDH9Q9HC56 1237 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 AGO4Q9HCK5 861 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SIX2Q9NPC8 291 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF302Q9NR11 478 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PICK1Q9NRD5 415 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PAPOLBQ9NRJ5 636 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 THAP1Q9NVV9 213 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NSMCE4AQ9NXX6 385 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCNK4Q9NYG8 393 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP39A1Q9NYL5 469 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RBAKQ9NYW8 714 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SMARCAL1Q9NZC9 954 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZFATQ9P243 1243 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HEY2Q9UBP5 337 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GABBR1Q9UBS5 961 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRKAG3Q9UGI9 489 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SRP68Q9UHB9 627 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TAGLN3Q9UI15 199 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 IPO11Q9UI26 975 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 XPO7Q9UIA9 1087 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LNPEPQ9UIQ6 1025 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TLK1Q9UKI8 766 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRPC5Q9UL62 973 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 POLIQ9UNA4 740 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SHOC2Q9UQ13 582 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRCH1Q9Y2L9 728 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GPSM3Q9Y4H4 160 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDY2AQ9Y6F7 541 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDY1Q9Y6F8 540 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 COMMD10Q9Y6G5 202 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC4A7Q9Y6M7 1214 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 DOT1LQ8TEK3 1739 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 COL22A1Q8NFW1 1626 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ASTN1O14525 1302 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF536O15090 1300 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NFASCO94856 1347 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TNRC6CQ9HCJ0 1690 aaKnown RBP2.15□□□□□ -2.06
RNU1-40P-201ENST00000516816 SHANK3Q9BYB0 1731 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 IGLV3-22A0A075B6J6 115 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 KANSL1LA0AUZ9 987 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 DYTNA2CJ06 578 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 WDR91A4D1P6 747 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 KLRG2A4D1S0 409 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TMEM191CA6NGB0 347 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 DDTLA6NHG4 134 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 SDR42E2A6NKP2 422 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TRPC5OSA6NMA1 111 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ERI2A8K979 691 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HACD1B0YJ81 288 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 RSPH10B2B2RC85 870 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TCP10L2B9ZVM9 353 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 APOC4-APOC2K7ER74 178 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 EML1O00423 815 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 APOL1O14791 398 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 KLF11O14901 512 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CASQ2O14958 399 aaPredicted RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PFDN6O15212 129 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CHADO15335 359 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 LIASO43766 372 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CREB3O43889 395 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ECE2O60344 883 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 CST8O60676 142 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NOL3O60936 208 aaKnown RBP2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 DNAJC6O75061 913 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 TOM1L1O75674 476 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 GDF11O95390 407 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 PSMG1O95456 288 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 NPTXRO95502 500 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ESRRBO95718 433 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZBED1O96006 694 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 IL1BP01584 269 aa2.15□□□□□ -2.07
RNU1-40P-201ENST00000516816 HLA-DRAP01903 254 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms