RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 AWAT1Q58HT5 328 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 TCTE1Q5JU00 501 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 TMTC4Q5T4D3 741 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 AFMIDQ63HM1 303 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 SERPINA13PQ6UXR4 307 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF572Q7Z3I7 529 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 KIF18BQ86Y91 864 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 EPHX4Q8IUS5 362 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRR26Q8N8Z3 221 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 MSI2Q96DH6 328 aaKnown RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 LRIG1Q96JA1 1093 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZSWIM4Q9H7M6 989 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 A0A1W2PQU0 124 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 CDHR4A6H8M9 788 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 GSG1L2A8MUP6 293 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRAMEF4O60810 478 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 ARIH2O95376 493 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 GASTP01350 101 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 LTA4HP09960 611 aaKnown RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZBTB48P10074 688 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TBXAS1P24557 533 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 LIPAP38571 399 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 PCYT1AP49585 367 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 EIF6P56537 245 aaKnown RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TBX2Q13207 712 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 HLXQ14774 488 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 FAM187BQ17R55 369 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TMEM30BQ3MIR4 351 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 PREPLQ4J6C6 727 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TCTEX1D4Q5JR98 221 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 KIAA1841Q6NSI8 718 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF529Q6P280 563 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 H1FNTQ75WM6 255 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 UBE3BQ7Z3V4 1068 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 KRT26Q7Z3Y9 468 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 WDR53Q7Z5U6 358 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 MTDHQ86UE4 582 aaKnown RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TRMT2AQ8IZ69 625 aaKnown RBP-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TERB1Q8NA31 727 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 OSBP2Q969R2 916 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 SNX18Q96RF0 628 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 MYOCQ99972 504 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 MYL10Q9BUA6 226 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 TPSD1Q9BZJ3 242 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 BCL11AQ9H165 835 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 SERHLQ9NQF3 203 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 DECR2Q9NUI1 292 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 PLK2Q9NYY3 685 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 SLC23A1Q9UHI7 598 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 GGT7Q9UJ14 662 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 RNF215Q9Y6U7 377 aa-0.17□□□□□ -2.44
RNU6-539P-201ENST00000516665 PHGR1C9JFL3 82 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 H0YGN5 161 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 DVL2O14641 736 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 HIP1RO75146 1068 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRPF6O94906 941 aaKnown RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 APOL3O95236 402 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 KLKB1P03952 638 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF26P17031 533 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 EN2P19622 333 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRPH2P23942 346 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 CRHR1P34998 444 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 PTPN7P35236 360 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 NPTX2P47972 431 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ALDH9A1P49189 494 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 PPP3CAQ08209 521 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 RBBP5Q15291 538 aaKnown RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ST3GAL2Q16842 350 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 C19orf54Q5BKX5 351 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 NAPEPLDQ6IQ20 393 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 FAM166AQ6J272 317 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF793Q6ZN11 406 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 CREB3L2Q70SY1 520 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ADIPOR2Q86V24 386 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 LIX1LQ8IVB5 337 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 FAM169BQ8N8A8 192 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 NSUN7Q8NE18 718 aaKnown RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF721Q8TF20 911 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 SNX33Q8WV41 574 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ATRIPQ8WXE1 791 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF501Q96CX3 271 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 SLC46A1Q96NT5 459 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 SLC25A33Q9BSK2 321 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 THAP7Q9BT49 309 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 ACTRT3Q9BYD9 372 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 BARHL1Q9BZE3 327 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 AMBRA1Q9C0C7 1298 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 MSRB1Q9NZV6 116 aa-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 GNEQ9Y223 722 aaKnown RBP-0.18□□□□□ -2.44
RNU6-539P-201ENST00000516665 SLC12A8A0AV02 714 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 B2RBV5 119 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 TOR1BO14657 336 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 TLX3O43711 291 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 ATG13O75143 517 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 ATP5JP18859 108 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 ECHS1P30084 290 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 RFX2P48378 723 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 CLCN2P51788 898 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 KCNJ12Q14500 433 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 SLC9C1Q4G0N8 1177 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms