RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 IGFBP6P24592 240 aaPredicted RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ACAT1P24752 427 aaKnown RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PCSK1P29120 753 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ADORA2BP29275 332 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MAN1A1P33908 653 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC1A1P43005 524 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GABRB2P47870 512 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 BCAT1P54687 386 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SNX16P57768 344 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DSC1Q08554 894 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 IKBKEQ14164 716 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF268Q14587 947 aaPredicted RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LRRC26Q2I0M4 334 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PAN2Q504Q3 1202 aaKnown RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CNKSR3Q6P9H4 555 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TTC30AQ86WT1 665 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF280BQ86YH2 543 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NPAS4Q8IUM7 802 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ANKRD52Q8NB46 1076 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC2A14Q8TDB8 520 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RSPH1Q8WYR4 309 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SUSD3Q96L08 255 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CPXM1Q96SM3 734 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SYT15Q9BQS2 421 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SELENOOQ9BVL4 669 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MRPL9Q9BYD2 267 aaKnown RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TIMM13Q9Y5L4 95 aaPredicted RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 V9GYY5 206 aaPredicted RBP8.07□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PTPRDP23468 1912 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TCRBV5S1A1TA0A578 114 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CCDC66A2RUB6 948 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TMEM191CA6NGB0 347 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SIGLEC16A6NMB1 481 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GOLGA8SH3BPF8 625 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TMEM189-UBE2V1I3L0A0 370 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 M0QZQ0 153 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PDE2AO00408 941 aaPredicted RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DDX3YO15523 660 aaKnown RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TRAPPC3O43617 180 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CEP104O60308 925 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 B4GALT3O60512 393 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ATP2C2O75185 946 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CAPN15O75808 1086 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GJB6O95452 261 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ERBB2P04626 1255 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CYP11A1P05108 521 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PFKMP08237 780 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KRT3P12035 628 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TYMPP19971 482 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CTNNA2P26232 953 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CTNNA1P35221 906 aaKnown RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 BRCC3P46736 316 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 OR1G1P47890 313 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RGS7P49802 495 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GATMP50440 423 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GSCP56915 257 aaPredicted RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC8A3P57103 927 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RPL7AP62424 266 aaKnown RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PDE4CQ08493 712 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 BST2Q10589 180 aaKnown RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TCTN1Q2MV58 587 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ERCC6LQ2NKX8 1250 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MDH1BQ5I0G3 518 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PPP1R15BQ5SWA1 713 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TEX35Q5T0J7 233 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 OR6B2Q6IFH4 312 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CD300LGQ6UXG3 332 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF572Q7Z3I7 529 aaPredicted RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 XYLT1Q86Y38 959 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 COLGALT2Q8IYK4 626 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FUKQ8N0W3 1084 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 THEM5Q8N1Q8 247 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 HASPINQ8TF76 798 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC35F5Q8WV83 523 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MCRS1Q96EZ8 462 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MS4A14Q96JA4 679 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CASD1Q96PB1 797 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MCEEQ96PE7 176 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 HNRNPABQ99729 332 aaKnown RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MED10Q9BTT4 135 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 COLEC11Q9BWP8 271 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC4A5Q9BY07 1137 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TRIM7Q9C029 511 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CARD9Q9H257 536 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 METTL5Q9NRN9 209 aaKnown RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CDH9Q9ULB4 789 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PCDHB8Q9UN66 801 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 USTQ9Y2C2 406 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PRG3Q9Y2Y8 225 aaPredicted RBP8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms