RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 BHMT2Q9H2M3 363 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 SLC12A5Q9H2X9 1139 aa5□□□□□ -1.61
LINC01088-211ENST00000515597 PNMA8BQ9ULN7 279 aaPredicted RBP5□□□□□ -1.61
LINC01088-211ENST00000515597 E2F8A0AVK6 867 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 H3BUI4 141 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 PPP6CO00743 305 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 DNAJB5O75953 348 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 ALDH2P05091 517 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 PDGFRBP09619 1106 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 PIM1P11309 404 aaPredicted RBP4.99□□□□□ -1.61
LINC01088-211ENST00000515597 CERS1P27544 350 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 ANAPC15P60006 121 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 EXOSC9Q06265 439 aaKnown RBP4.99□□□□□ -1.61
LINC01088-211ENST00000515597 PIN1Q13526 163 aaPredicted RBP4.99□□□□□ -1.61
LINC01088-211ENST00000515597 TTF1Q15361 905 aaPredicted RBP4.99□□□□□ -1.61
LINC01088-211ENST00000515597 FAM177A1Q8N128 213 aaPredicted RBP4.99□□□□□ -1.61
LINC01088-211ENST00000515597 FAM46DQ8NEK8 389 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 DENND1AQ8TEH3 1009 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 C1GALT1C1Q96EU7 318 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 NELL2Q99435 816 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 DDX56Q9NY93 547 aaKnown RBP4.99□□□□□ -1.61
LINC01088-211ENST00000515597 HESX1Q9UBX0 185 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 TBC1D30Q9Y2I9 924 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 STXBP5LQ9Y2K9 1186 aa4.99□□□□□ -1.61
LINC01088-211ENST00000515597 OFD1O75665 1012 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 FAM163BP0C2L3 166 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 HDCP19113 662 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 NCLP19338 710 aaKnown RBP4.98□□□□□ -1.61
LINC01088-211ENST00000515597 SFPQP23246 707 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC01088-211ENST00000515597 CYP2C18P33260 490 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 LIPAP38571 399 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 SOX8P57073 446 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 CCDC157Q569K6 752 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 ZNF618Q5T7W0 954 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 TEDDM1Q5T9Z0 273 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 SLC9A4Q6AI14 798 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 SFRP4Q6FHJ7 346 aaPredicted RBP4.98□□□□□ -1.61
LINC01088-211ENST00000515597 TMEM108Q6UXF1 575 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 DIS3LQ8TF46 1054 aaKnown RBP4.98□□□□□ -1.61
LINC01088-211ENST00000515597 TBC1D5Q92609 795 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 CAMKK2Q96RR4 588 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 CGRRF1Q99675 332 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 MACROD1Q9BQ69 325 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 KRTAP1-5Q9BYS1 174 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 DLL3Q9NYJ7 618 aa4.98□□□□□ -1.61
LINC01088-211ENST00000515597 DCLK1O15075 740 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 MOSPD3O75425 235 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 ARHGAP25P42331 645 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 ALDH9A1P49189 494 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 ZNF134P52741 427 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 EEFSECP57772 596 aaKnown RBP4.97□□□□□ -1.61
LINC01088-211ENST00000515597 LOXL3P58215 753 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 SP2Q02086 613 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 AARS2Q5JTZ9 985 aaKnown RBP4.97□□□□□ -1.61
LINC01088-211ENST00000515597 IFIT1BQ5T764 474 aaKnown RBP4.97□□□□□ -1.61
LINC01088-211ENST00000515597 GRAMD1CQ8IYS0 662 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 PLBD2Q8NHP8 589 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 MTFMTQ96DP5 389 aaKnown RBP4.97□□□□□ -1.61
LINC01088-211ENST00000515597 AIFM3Q96NN9 605 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 SLC46A1Q96NT5 459 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 SPRTNQ9H040 489 aaPredicted RBP4.97□□□□□ -1.61
LINC01088-211ENST00000515597 SARS2Q9NP81 518 aaKnown RBP4.97□□□□□ -1.61
LINC01088-211ENST00000515597 PLEKHM1Q9Y4G2 1056 aa4.97□□□□□ -1.61
LINC01088-211ENST00000515597 PRRT4C9JH25 899 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 QSOX1O00391 747 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 KCNAB3O43448 404 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 AKAP10O43572 662 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 TOP3BO95985 862 aaKnown RBP4.96□□□□□ -1.62
LINC01088-211ENST00000515597 CT47B1P0C2W7 299 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-211ENST00000515597 ATXN1LP0C7T5 689 aaKnown RBP4.96□□□□□ -1.62
LINC01088-211ENST00000515597 ENGP17813 658 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 RAB1AP62820 205 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 IGBP1P78318 339 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 CYP4F2P78329 520 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 ZNF267Q14586 743 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-211ENST00000515597 LONRF3Q496Y0 759 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 KHDC1LQ5JSQ8 128 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 TREML2Q5T2D2 321 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 ANKRD16Q6P6B7 361 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 NAPRTQ6XQN6 538 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 ZNF804AQ7Z570 1209 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 DTX2Q86UW9 622 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.96□□□□□ -1.62
LINC01088-211ENST00000515597 RTFDC1Q9BY42 306 aaPredicted RBP4.96□□□□□ -1.62
LINC01088-211ENST00000515597 TTYH3Q9C0H2 523 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 SERTAD3Q9UJW9 196 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 PCDHA6Q9UN73 950 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 MED16Q9Y2X0 877 aa4.96□□□□□ -1.62
LINC01088-211ENST00000515597 A0A088AWK7 358 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 KCNU1A8MYU2 1149 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 H3BML4 177 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 TRIM38O00635 465 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 SLC16A3O15427 465 aaKnown RBP4.95□□□□□ -1.62
LINC01088-211ENST00000515597 RFPL1O75677 317 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 UNC5CO95185 931 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 TUBB4AP04350 444 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
LINC01088-211ENST00000515597 CCT4P50991 539 aaKnown RBP4.95□□□□□ -1.62
LINC01088-211ENST00000515597 IQCB1Q15051 598 aa4.95□□□□□ -1.62
LINC01088-211ENST00000515597 PCID2Q5JVF3 399 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms