RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 SYT15Q9BQS2 421 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 SLC46A2Q9BY10 475 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 KIF9Q9HAQ2 790 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 USP25Q9UHP3 1055 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 CDH9Q9ULB4 789 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 MAGED2Q9UNF1 606 aaPredicted RBP18.73■□□□□ 0.59
DDX41-217ENST00000515562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.72■□□□□ 0.59
DDX41-217ENST00000515562 ACTN4O43707 911 aaKnown RBP18.72■□□□□ 0.59
DDX41-217ENST00000515562 NOL4O94818 638 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 MYL1P05976 194 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 WARSP23381 471 aaKnown RBP18.72■□□□□ 0.59
DDX41-217ENST00000515562 MAGEA11P43364 429 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 KRT85P78386 507 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 LRRC32Q14392 662 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 DDR2Q16832 855 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 FAM171BQ6P995 826 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 MAMSTRQ6ZN01 415 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 GPIHBP1Q8IV16 184 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 GRAMD1CQ8IYS0 662 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 ATRIPQ8WXE1 791 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 MYRFLQ96LU7 910 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 LRRC3BQ96PB8 259 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 MMS19Q96T76 1030 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 FAM126AQ9BYI3 521 aaPredicted RBP18.72■□□□□ 0.59
DDX41-217ENST00000515562 EXOC1Q9NV70 894 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 ZSCAN32Q9NX65 697 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 SERTAD1Q9UHV2 236 aa18.72■□□□□ 0.59
DDX41-217ENST00000515562 PTPRZ1P23471 2315 aaPredicted RBP18.71■□□□□ 0.59
DDX41-217ENST00000515562 MYBPHLA2RUH7 354 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 SPECC1L-ADORA2AF8WAN1 911 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 HCRTO43612 131 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 PFKFB1P16118 471 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 CMA1P23946 247 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 CTHP32929 405 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 CCR3P51677 355 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 TNNC1P63316 161 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 SDHAF4Q5VUM1 108 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 VSTM1Q6UX27 236 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 MON1AQ86VX9 555 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 MAB21L3Q8N8X9 362 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 NELL1Q92832 810 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 ZFYVE19Q96K21 471 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 SPATA32Q96LK8 384 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 CEP295NLQ96MC4 621 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 SMG9Q9H0W8 520 aaKnown RBP18.71■□□□□ 0.59
DDX41-217ENST00000515562 LMAN1LQ9HAT1 526 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 TDP1Q9NUW8 608 aa18.71■□□□□ 0.59
DDX41-217ENST00000515562 KLRC4O43908 158 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 EXOC3O60645 756 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
DDX41-217ENST00000515562 FAM163BP0C2L3 166 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 CHRNB1P11230 501 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 SOX9P48436 509 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 PSMC1P62191 440 aaKnown RBP18.7■□□□□ 0.58
DDX41-217ENST00000515562 PSMD2Q13200 908 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 CCDC142Q17RM4 750 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 SCN4BQ8IWT1 228 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 ZBTB44Q8NCP5 570 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 STKLD1Q8NE28 680 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 MYLPFQ96A32 169 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 PAGE5Q96GU1 130 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 SNX25Q9H3E2 840 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 GTSE1Q9NYZ3 720 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 MAGEC2Q9UBF1 373 aaPredicted RBP18.7■□□□□ 0.58
DDX41-217ENST00000515562 ATP6V1DQ9Y5K8 247 aa18.7■□□□□ 0.58
DDX41-217ENST00000515562 GVINP1Q7Z2Y8 2422 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 TACC1O75410 805 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 TADA3O75528 432 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 LMO2P25791 158 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 NRLP54845 237 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 TRPC3Q13507 836 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 ZNF268Q14587 947 aaPredicted RBP18.69■□□□□ 0.58
DDX41-217ENST00000515562 ITPRIPL2Q3MIP1 535 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 DGKKQ5KSL6 1271 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 TXNDC8Q6A555 127 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 FSIP1Q8NA03 581 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 KIAA0895Q8NCT3 520 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 TMEM174Q8WUU8 243 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 RUBCNQ92622 972 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 USP13Q92995 863 aaPredicted RBP18.69■□□□□ 0.58
DDX41-217ENST00000515562 SYAP1Q96A49 352 aaPredicted RBP18.69■□□□□ 0.58
DDX41-217ENST00000515562 HINFPQ9BQA5 517 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 CRTAC1Q9NQ79 661 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 EHD2Q9NZN4 543 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 HPSEQ9Y251 543 aa18.69■□□□□ 0.58
DDX41-217ENST00000515562 PTPRDP23468 1912 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 ZNF638Q14966 1978 aaKnown RBP18.68■□□□□ 0.58
DDX41-217ENST00000515562 A0A1B0GVL5 298 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 ATP2C2O75185 946 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 CST3P01034 146 aaPredicted RBP18.68■□□□□ 0.58
DDX41-217ENST00000515562 ATICP31939 592 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 AP3M2P53677 418 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 CYP27A1Q02318 531 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 TNK2Q07912 1038 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 STK4Q13043 487 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 WDR72Q3MJ13 1102 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 KMT5BQ4FZB7 885 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 TSSK4Q6SA08 328 aa18.68■□□□□ 0.58
DDX41-217ENST00000515562 SLC9A9Q8IVB4 645 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms