RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 HMGA1P17096 107 aaKnown RBP14.62□□□□□ -0.07
TCOF1-215ENST00000515516 WARSP23381 471 aaKnown RBP14.62□□□□□ -0.07
TCOF1-215ENST00000515516 ANXA13P27216 316 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 ATICP31939 592 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 AP3M2P53677 418 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 CYP27A1Q02318 531 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 LRRC32Q14392 662 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 WDR72Q3MJ13 1102 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 CC2D1AQ6P1N0 951 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-215ENST00000515516 FAM171BQ6P995 826 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 OR6B3Q8NGW1 331 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 TTC8Q8TAM2 541 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 SYAP1Q96A49 352 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-215ENST00000515516 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 DOCK6Q96HP0 2047 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 PKMYT1Q99640 499 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 SMG9Q9H0W8 520 aaKnown RBP14.62□□□□□ -0.07
TCOF1-215ENST00000515516 EHD2Q9NZN4 543 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 CACNA1HO95180 2353 aa14.62□□□□□ -0.07
TCOF1-215ENST00000515516 ARNTLO00327 626 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 HCRTO43612 131 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 ATP2C2O75185 946 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 NOL4O94818 638 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 PRAMEF12O95522 483 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 LMO2P25791 158 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 GRIK1P39086 918 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 MAGEA11P43364 429 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 PSMC1P62191 440 aaKnown RBP14.61□□□□□ -0.07
TCOF1-215ENST00000515516 STK4Q13043 487 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 BIRC3Q13489 604 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 TXNDC8Q6A555 127 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 VSTM1Q6UX27 236 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 LIMS2Q7Z4I7 341 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 MON1AQ86VX9 555 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 RALGPS2Q86X27 583 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-215ENST00000515516 MAML2Q8IZL2 1156 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-215ENST00000515516 KBTBD7Q8WVZ9 684 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 MYLPFQ96A32 169 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 TRMT2BQ96GJ1 504 aaKnown RBP14.61□□□□□ -0.07
TCOF1-215ENST00000515516 ZFYVE19Q96K21 471 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 HINFPQ9BQA5 517 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 CHRDQ9H2X0 955 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 KIF9Q9HAQ2 790 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 TRPC7Q9HCX4 862 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 TDP1Q9NUW8 608 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 NXF1Q9UBU9 619 aaKnown RBP14.61□□□□□ -0.07
TCOF1-215ENST00000515516 PCDHGA2Q9Y5H1 932 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 NCANO14594 1321 aa14.61□□□□□ -0.07
TCOF1-215ENST00000515516 SPECC1L-ADORA2AF8WAN1 911 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 CALUO43852 315 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-215ENST00000515516 KLRC4O43908 158 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 TACC1O75410 805 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 RPN1P04843 607 aaKnown RBP14.6□□□□□ -0.07
TCOF1-215ENST00000515516 BDNFP23560 247 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 CCR3P51677 355 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 NRLP54845 237 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 MYL6P60660 151 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 MTAPQ13126 283 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 FZD5Q13467 585 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 ITPRIPL2Q3MIP1 535 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 TMEM150AQ86TG1 271 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 STKLD1Q8NE28 680 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 MYCBPAPQ8TBZ2 947 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 MYRFLQ96LU7 910 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 CEP295NLQ96MC4 621 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 LRRC3BQ96PB8 259 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 MRPL45Q9BRJ2 306 aaKnown RBP14.6□□□□□ -0.07
TCOF1-215ENST00000515516 GKN1Q9NS71 199 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 ZSCAN32Q9NX65 697 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 GTSE1Q9NYZ3 720 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 HPSEQ9Y251 543 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 FRMD4BQ9Y2L6 1034 aa14.6□□□□□ -0.07
TCOF1-215ENST00000515516 ZFHX2Q9C0A1 2572 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-215ENST00000515516 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 TRAV19A0A0A6YYK7 116 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 SHISA7A6NL88 538 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 A8MXQ7 604 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 PDXKO00764 312 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 TRIM66O15016 1216 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 STAU1O95793 577 aaKnown RBP14.59□□□□□ -0.07
TCOF1-215ENST00000515516 USP17L7P0C7H9 530 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 CHRNB1P11230 501 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 P4HA1P13674 534 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 SOX9P48436 509 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 PDE6CP51160 858 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 NDUFA8P51970 172 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 AMPD2Q01433 879 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 BECN1Q14457 450 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 ZNF699Q32M78 642 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 MDH1BQ5I0G3 518 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 DGKKQ5KSL6 1271 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 CEP135Q66GS9 1140 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 SLC9A9Q8IVB4 645 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 ZNF687Q8N1G0 1237 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 KIAA0895Q8NCT3 520 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 TTC16Q8NEE8 873 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 ZNF516Q92618 1163 aa14.59□□□□□ -0.07
TCOF1-215ENST00000515516 USP13Q92995 863 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-215ENST00000515516 EXOC4Q96A65 974 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms