RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SPPL2BQ8TCT7 592 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 PPP2R3CQ969Q6 453 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 LPIN3Q9BQK8 851 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 B3GNT5Q9BYG0 378 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 ACP6Q9NPH0 428 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 FAM49BQ9NUQ9 324 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 HSFX1Q9UBD0 423 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 AFF4Q9UHB7 1163 aaKnown RBP22.28■■□□□ 1.16
LSM6-207ENST00000515311 NOCTQ9UK39 431 aaKnown RBP22.28■■□□□ 1.16
LSM6-207ENST00000515311 PCDHB5Q9Y5E4 795 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 BZW2Q9Y6E2 419 aaKnown RBP22.28■■□□□ 1.16
LSM6-207ENST00000515311 ATP8B3O60423 1300 aa22.28■■□□□ 1.16
LSM6-207ENST00000515311 MTMR11A4FU01 709 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 THAP12O43422 761 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 CCDC130P13994 396 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 ATF2P15336 505 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 BRD2P25440 801 aaKnown RBP22.27■■□□□ 1.16
LSM6-207ENST00000515311 KLRC2P26717 231 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 CYP27A1Q02318 531 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 CNGA2Q16280 664 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 PPP1R26Q5T8A7 1209 aaPredicted RBP22.27■■□□□ 1.16
LSM6-207ENST00000515311 LCLAT1Q6UWP7 414 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 RNF19BQ6ZMZ0 732 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 NOP9Q86U38 636 aaKnown RBP22.27■■□□□ 1.16
LSM6-207ENST00000515311 SPATA2LQ8IUW3 424 aaPredicted RBP22.27■■□□□ 1.16
LSM6-207ENST00000515311 GLYCTKQ8IVS8 523 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 SLC2A14Q8TDB8 520 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 ZNF606Q8WXB4 792 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 ZSWIM1Q9BR11 485 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.27■■□□□ 1.16
LSM6-207ENST00000515311 MYO7AQ13402 2215 aa22.27■■□□□ 1.16
LSM6-207ENST00000515311 MTCL1Q9Y4B5 1905 aaKnown RBP22.27■■□□□ 1.16
LSM6-207ENST00000515311 CLASP2O75122 1294 aaKnown RBP22.26■■□□□ 1.15
LSM6-207ENST00000515311 VNN2O95498 520 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 SERPING1P05155 500 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 MAGEA11P43364 429 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 GSDMDP57764 484 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 LILRA6Q6PI73 481 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 PAQR9Q6ZVX9 377 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 FAM35AQ86V20 835 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 DDX1Q92499 740 aaKnown RBP22.26■■□□□ 1.15
LSM6-207ENST00000515311 PDLIM2Q96JY6 352 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 PANX2Q96RD6 677 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 CDCA3Q99618 268 aaPredicted RBP22.26■■□□□ 1.15
LSM6-207ENST00000515311 NSUN3Q9H649 340 aaKnown RBP22.26■■□□□ 1.15
LSM6-207ENST00000515311 ZNHIT6Q9NWK9 470 aaKnown RBP22.26■■□□□ 1.15
LSM6-207ENST00000515311 PCDHGC3Q9UN70 934 aa22.26■■□□□ 1.15
LSM6-207ENST00000515311 TGM5O43548 720 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 GLUD1P00367 558 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 CALCAP01258 141 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 CLCN4P51793 760 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 CDR2Q01850 454 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 ADCY1Q08828 1119 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 GOLGA8FQ08AF8 430 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 GOLGA8DPQ0D2H9 430 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 KLHL30Q0D2K2 578 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 DUSP6Q16828 381 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 HGSNATQ68CP4 663 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 VSTM1Q6UX27 236 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 ADGRD2Q7Z7M1 963 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 PALB2Q86YC2 1186 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 SMARCD1Q96GM5 515 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 PGLYRP2Q96PD5 576 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 MED10Q9BTT4 135 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 ZNF518BQ9C0D4 1074 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 TLE6Q9H808 572 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 ABI2Q9NYB9 513 aaPredicted RBP22.25■■□□□ 1.15
LSM6-207ENST00000515311 TSPAN16Q9UKR8 245 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 MYH10P35580 1976 aa22.25■■□□□ 1.15
LSM6-207ENST00000515311 PATJQ8NI35 1801 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 CLDN5O00501 218 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 CDK17Q00537 523 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 GOLGA7BQ2TAP0 167 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 WDR59Q6PJI9 974 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 GPIHBP1Q8IV16 184 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 TCEAL8Q8IYN2 117 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 ANKRD52Q8NB46 1076 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 ATAD1Q8NBU5 361 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 SLC22A17Q8WUG5 538 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 SYT11Q9BT88 431 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 KRT82Q9NSB4 513 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 HESX1Q9UBX0 185 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 FBXW11Q9UKB1 542 aa22.24■■□□□ 1.15
LSM6-207ENST00000515311 MICAL2O94851 1124 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 FAM200BP0CF97 657 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 ADORA2BP29275 332 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 BCAT1P54687 386 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 PKDCCQ504Y2 493 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 RTL10Q7L3V2 364 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 HDAC7Q8WUI4 952 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 SLC20A1Q8WUM9 679 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 LHX5Q9H2C1 402 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 HAUS4Q9H6D7 363 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 CSNK1G1Q9HCP0 422 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 DPP7Q9UHL4 492 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 MTCH2Q9Y6C9 303 aa22.23■■□□□ 1.15
LSM6-207ENST00000515311 AP1G2O75843 785 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 LSM8O95777 96 aaKnown RBP22.22■■□□□ 1.15
LSM6-207ENST00000515311 SETSIPP0DME0 302 aa22.22■■□□□ 1.15
LSM6-207ENST00000515311 HAPLN1P10915 354 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms