RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 PLCB3Q01970 1234 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 ZKSCAN8Q15776 578 aaPredicted RBP18.4■□□□□ 0.54
SNX2-213ENST00000514949 KIAA0319LQ8IZA0 1049 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 TRPM4Q8TD43 1214 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 CPT1BQ92523 772 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 ACSF2Q96CM8 615 aaPredicted RBP18.4■□□□□ 0.54
SNX2-213ENST00000514949 NCAPGQ9BPX3 1015 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 VPS37BQ9H9H4 285 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 RABGEF1Q9UJ41 708 aa18.4■□□□□ 0.54
SNX2-213ENST00000514949 CLUHO75153 1309 aa18.39■□□□□ 0.54
SNX2-213ENST00000514949 POC1B-GALNT4F8VUJ3 575 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 GABRB2P47870 512 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 SLC26A2P50443 739 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 RAD23BP54727 409 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
SNX2-213ENST00000514949 KCNJ2P63252 427 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 MOGSQ13724 837 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 ATF7IP2Q5U623 682 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 JOSD2Q8TAC2 188 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 VRTNQ9H8Y1 702 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 TNFSF13BQ9Y275 285 aa18.39■□□□□ 0.53
SNX2-213ENST00000514949 SOCS7O14512 581 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 CST8O60676 142 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 KRT15P19012 456 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 PHBP35232 272 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
SNX2-213ENST00000514949 ARL4CP56559 192 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 PSMC1P62191 440 aaKnown RBP18.38■□□□□ 0.53
SNX2-213ENST00000514949 MYO1EQ12965 1108 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 TFDP1Q14186 410 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 LY6KQ17RY6 165 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 CELF3Q5SZQ8 465 aaKnown RBP18.38■□□□□ 0.53
SNX2-213ENST00000514949 XYLT1Q86Y38 959 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 ATP11CQ8NB49 1132 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 HAUS1Q96CS2 278 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 KLHL29Q96CT2 875 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 GGA3Q9NZ52 723 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 SIX4Q9UIU6 781 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 GGT7Q9UJ14 662 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 AGTPBP1Q9UPW5 1226 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 IGF2BP3O00425 579 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNX2-213ENST00000514949 SPAG7O75391 227 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 UNC5CO95185 931 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 IFNB1P01574 187 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 SPDYAQ5MJ70 313 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 ADGRD1Q6QNK2 874 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 MCRS1Q96EZ8 462 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 ACSS3Q9H6R3 686 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 GPRC5DQ9NZD1 345 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 MCM8Q9UJA3 840 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 MGAMO43451 1857 aa18.38■□□□□ 0.53
SNX2-213ENST00000514949 APOC4-APOC2K7ER74 178 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 EDF1O60869 148 aaKnown RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 ATP5HO75947 161 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 ARIH2O95376 493 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 ITGBL1O95965 494 aaPredicted RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 APOC2P02655 101 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 EZRP15311 586 aaKnown RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 RPA3P35244 121 aaPredicted RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 RPL22P35268 128 aaKnown RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 HSDL1Q3SXM5 330 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 SCARA5Q6ZMJ2 495 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 PNMA8AQ86V59 439 aaPredicted RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 LRRC71Q8N4P6 559 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 CXorf38Q8TB03 319 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 CPXM1Q96SM3 734 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 MPHOSPH6Q99547 160 aaKnown RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 FAM124BQ9H5Z6 455 aaPredicted RBP18.37■□□□□ 0.53
SNX2-213ENST00000514949 GRID1Q9ULK0 1009 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 PHTF1Q9UMS5 762 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 POLIQ9UNA4 740 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 USH1CQ9Y6N9 552 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 ENDOD1O94919 500 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 ZWINTO95229 277 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 PCK1P35558 622 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 MAP2K2P36507 400 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 GDF10P55107 478 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 POU5F1BQ06416 359 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 VGLL4Q14135 290 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 SLC4A11Q8NBS3 891 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 PYROXD1Q8WU10 500 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 CDT1Q9H211 546 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 KIF9Q9HAQ2 790 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 CYP3A43Q9HB55 503 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 TJP2Q9UDY2 1190 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 BAIAP2L1Q9UHR4 511 aa18.37■□□□□ 0.53
SNX2-213ENST00000514949 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.36■□□□□ 0.53
SNX2-213ENST00000514949 GOLGA8SH3BPF8 625 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 IRF6O14896 467 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 PEX10O60683 326 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 CD19P15391 556 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 MBTD1Q05BQ5 628 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 FAM187BQ17R55 369 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 KLHL38Q2WGJ6 581 aa18.36■□□□□ 0.53
SNX2-213ENST00000514949 FNBP1LQ5T0N5 605 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms