RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SSTR3P32745 418 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 RAPGEF1Q13905 1077 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 MGAT5BQ3V5L5 792 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 SYCE2Q6PIF2 218 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 TMEM270Q6UE05 265 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 SPATA2LQ8IUW3 424 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 ZNF461Q8TAF7 563 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 SPATA18Q8TC71 538 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 GPR152Q8TDT2 470 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 PCED1BQ96HM7 432 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 ACBD6Q9BR61 282 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 B3GNT5Q9BYG0 378 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 GANQ9H2C0 597 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 ACP6Q9NPH0 428 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 TMEM30AQ9NV96 361 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 AFF4Q9UHB7 1163 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 DNAJC12Q9UKB3 198 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 INSL5Q9Y5Q6 135 aa10.44□□□□□ -0.74
TOPBP1-209ENST00000513818 A0A1B0GTH6 734 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 FAM170AA1A519 330 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 RNF225M0QZC1 329 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 AP5Z1O43299 807 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 ATF2P15336 505 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 ATF6P18850 670 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 BDNFP23560 247 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 TBXAS1P24557 533 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 CYP2F1P24903 491 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 ELF1P32519 619 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 USP8P40818 1118 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 RAD23BP54727 409 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 NTHL1P78549 312 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 GCNT1Q02742 428 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 TWF1Q12792 350 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 COL19A1Q14993 1142 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 PPM1LQ5SGD2 360 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 KLHDC7AQ5VTJ3 777 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 TPGS2Q68CL5 300 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 FAM35AQ86V20 835 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 DCP1BQ8IZD4 617 aaKnown RBP10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 SLC4A11Q8NBS3 891 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 RBBP8NLQ8NC74 664 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 MYCBPAPQ8TBZ2 947 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 SLC2A14Q8TDB8 520 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 GIPC2Q8TF65 315 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 JAKMIP2Q96AA8 810 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 MSLNLQ96KJ4 702 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 MED10Q9BTT4 135 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 NT5C1AQ9BXI3 368 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 XPO4Q9C0E2 1151 aaKnown RBP10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 NLRC4Q9NPP4 1024 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 KRT82Q9NSB4 513 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 HCFC1R1Q9NWW0 138 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 PCDHB5Q9Y5E4 795 aa10.43□□□□□ -0.74
TOPBP1-209ENST00000513818 CCDC195A0A1B0GUA6 201 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 GRXCR2A6NFK2 248 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 NOL4O94818 638 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 LRG1P02750 347 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 SRGAP2BP0DMP2 458 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 HAPLN1P10915 354 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 UCHL3P15374 230 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 CD19P15391 556 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 KCNQ1P51787 676 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 UBASH3AP57075 661 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 POLR2FP61218 127 aaKnown RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 NFE2Q16621 373 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 DDR2Q16832 855 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 FILIP1LQ4L180 1135 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 TMEM184AQ6ZMB5 413 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 PAQR9Q6ZVX9 377 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 UNC93AQ86WB7 457 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 SCN4BQ8IWT1 228 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 FUKQ8N0W3 1084 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 HLA-CQ95604 372 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 ZNF707Q96C28 371 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 TMEM176AQ96HP8 235 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 TNIP3Q96KP6 325 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 OXCT2Q9BYC2 517 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 GPR88Q9GZN0 384 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 SFXN1Q9H9B4 322 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 DZANK1Q9NVP4 752 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 CD207Q9UJ71 328 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 DENND4AQ7Z401 1863 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 PATJQ8NI35 1801 aa10.42□□□□□ -0.74
TOPBP1-209ENST00000513818 DOCK6Q96HP0 2047 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 MYO16Q9Y6X6 1858 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 LRRC10BA6NIK2 292 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 IL9P15248 144 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 ZNF132P52740 706 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 MFAP3P55082 362 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 YWHAEP62258 255 aaKnown RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 IFRD2Q12894 506 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 PLD1Q13393 1074 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 DRAP1Q14919 205 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 NR1I3Q14994 352 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms