RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ALG6Q9Y672 507 aa10.48□□□□□ -0.73
TPM3-221ENST00000513769 GRID2IPA4D2P6 1211 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 TMCO5BA8MYB1 307 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 GABRDO14764 452 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 FANCGO15287 622 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CLSTN1O94985 981 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CXCL10P02778 98 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CTSHP09668 335 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CD58P19256 250 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 ABCB4P21439 1286 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 WARSP23381 471 aaKnown RBP10.47□□□□□ -0.73
TPM3-221ENST00000513769 RFC2P35250 354 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 GJA8P48165 433 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CDH8P55286 799 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 GRIK3Q13003 919 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 MTFR1Q15390 333 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 PPP2R5EQ16537 467 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 UPP1Q16831 310 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 SOWAHAQ2M3V2 549 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 SCARA3Q6AZY7 606 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 NT5DC3Q86UY8 548 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 ZDHHC17Q8IUH5 632 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 WDTC1Q8N5D0 677 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CPA5Q8WXQ8 436 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 UBXN4Q92575 508 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 SEPT8Q92599 483 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 C18orf25Q96B23 403 aaPredicted RBP10.47□□□□□ -0.73
TPM3-221ENST00000513769 C18orf8Q96DM3 657 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 OSBPL9Q96SU4 736 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 GAD1Q99259 594 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 NAP1L3Q99457 506 aaPredicted RBP10.47□□□□□ -0.73
TPM3-221ENST00000513769 NCAPGQ9BPX3 1015 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 APOL6Q9BWW8 343 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 UBXN6Q9BZV1 441 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 ACP6Q9NPH0 428 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 TMEM161AQ9NX61 479 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 TAS2R14Q9NYV8 317 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 KLK14Q9P0G3 267 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CNOT8Q9UFF9 292 aaKnown RBP10.47□□□□□ -0.73
TPM3-221ENST00000513769 PUF60Q9UHX1 559 aaKnown RBP10.47□□□□□ -0.73
TPM3-221ENST00000513769 TFR2Q9UP52 801 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CAPN6Q9Y6Q1 641 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 UMODL1Q5DID0 1318 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CENPFP49454 3210 aa10.47□□□□□ -0.73
TPM3-221ENST00000513769 CCDC66A2RUB6 948 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 CTAGE15A4D2H0 777 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 SIGLEC16A6NMB1 481 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 ENC1O14682 589 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 ATP1A1P05023 1023 aaKnown RBP10.46□□□□□ -0.73
TPM3-221ENST00000513769 CTAGE8P0CG41 777 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 GPD2P43304 727 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 AARSP49588 968 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM3-221ENST00000513769 NDST1P52848 882 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 TUSC3Q13454 348 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 MAMLD1Q13495 774 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 GLB1LQ6UWU2 654 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 MON1BQ7L1V2 547 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 ARCQ7LC44 396 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 CTAGE6Q86UF2 777 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 PALB2Q86YC2 1186 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 CREG2Q8IUH2 290 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 CTAGE4Q8IX94 777 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 GPR161Q8N6U8 529 aaKnown RBP10.46□□□□□ -0.73
TPM3-221ENST00000513769 UBL4BQ8N7F7 174 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 ANKRD52Q8NB46 1076 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 FEZF2Q8TBJ5 459 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 ACTRT1Q8TDG2 376 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 FNIP1Q8TF40 1166 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 RABGGTAQ92696 567 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 HPS1Q92902 700 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 HTATIP2Q9BUP3 242 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 SDCBP2Q9H190 292 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 SNX25Q9H3E2 840 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 EVA1BQ9NVM1 165 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 TMEM51Q9NW97 253 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 MIOSQ9NXC5 875 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 POLIQ9UNA4 740 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM3-221ENST00000513769 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM3-221ENST00000513769 PCDHB7Q9Y5E2 793 aa10.46□□□□□ -0.73
TPM3-221ENST00000513769 MYH10P35580 1976 aa10.46□□□□□ -0.74
TPM3-221ENST00000513769 A8MXQ7 604 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 TMEM189-UBE2V1I3L0A0 370 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 O00370 1275 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 CYB561D2O14569 222 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 TRAPPC3O43617 180 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 MGEA5O60502 916 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 BUB1BO60566 1050 aaPredicted RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 ALDH2P05091 517 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 CYP11A1P05108 521 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 CD19P15391 556 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 MAN1A1P33908 653 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 ACADSBP45954 432 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 RPL34P49207 117 aaKnown RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 SLC8A3P57103 927 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 PTP4A2Q12974 167 aa10.45□□□□□ -0.74
TPM3-221ENST00000513769 PIGHQ14442 188 aaPredicted RBP10.45□□□□□ -0.74
TPM3-221ENST00000513769 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms