RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CUL4BQ13620 913 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SV2CQ496J9 727 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 PKDCCQ504Y2 493 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 FAM78AQ5JUQ0 283 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 ARMCX5Q6P1M9 558 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 CCDC65Q8IXS2 484 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 CCDC150Q8NCX0 1101 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 OR10T2Q8NGX3 314 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 BORCS6Q96GS4 357 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 ZNF560Q96MR9 790 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 TMEM209Q96SK2 561 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 FGFBP2Q9BYJ0 223 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 FOXQ1Q9C009 403 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 ZCWPW1Q9H0M4 648 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 TMEM206Q9H813 350 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 TRPV5Q9NQA5 729 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 KIAA1549LQ6ZVL6 1849 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 WDR87Q6ZQQ6 2873 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 GVINP1Q7Z2Y8 2422 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 KPNA7A9QM74 516 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 CYB561D2O14569 222 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 EXTL3O43909 919 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SERPINC1P01008 464 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 RPN1P04843 607 aaKnown RBP10.58□□□□□ -0.72
CCL28-203ENST00000513525 MYL4P12829 197 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 GLULP15104 373 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 MAGEA9P43362 315 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 WNT7BP56706 349 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 UBASH3AP57075 661 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 AMPD3Q01432 767 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 ZNF658Q5TYW1 1059 aaPredicted RBP10.58□□□□□ -0.72
CCL28-203ENST00000513525 STXBP4Q6ZWJ1 553 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 FRMD5Q7Z6J6 570 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 METTL23Q86XA0 190 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 LRRC8AQ8IWT6 810 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SYCP3Q8IZU3 236 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 THEM5Q8N1Q8 247 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 ATAD1Q8NBU5 361 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 ZSWIM2Q8NEG5 633 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SHKBP1Q8TBC3 707 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SPPL2BQ8TCT7 592 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 C2orf15Q8WU43 125 aaKnown RBP10.58□□□□□ -0.72
CCL28-203ENST00000513525 CACTINQ8WUQ7 758 aaKnown RBP10.58□□□□□ -0.72
CCL28-203ENST00000513525 DEPDC1BQ8WUY9 529 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 PSMG2Q969U7 264 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
CCL28-203ENST00000513525 E2F7Q96AV8 911 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 SAAL1Q96ER3 474 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 NELL2Q99435 816 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 FAM213AQ9BRX8 229 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 TRIM9Q9C026 710 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 LTB4R2Q9NPC1 389 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 RBAKQ9NYW8 714 aaPredicted RBP10.58□□□□□ -0.72
CCL28-203ENST00000513525 NFE2L3Q9Y4A8 694 aa10.58□□□□□ -0.72
CCL28-203ENST00000513525 RALGAPA1Q6GYQ0 2036 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 OTOGLQ3ZCN5 2332 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 EIF3DO15371 548 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCL28-203ENST00000513525 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
CCL28-203ENST00000513525 FGF19O95750 216 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 ATP1A3P13637 1013 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 PSMC3P17980 439 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 PPP1R2P41236 205 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 TUFMP49411 452 aaKnown RBP10.57□□□□□ -0.72
CCL28-203ENST00000513525 TERF1P54274 439 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 TEAD2Q15562 447 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 SLC39A12Q504Y0 691 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 VITQ6UXI7 678 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 TPRG1Q6ZUI0 275 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 ASCL5Q7RTU5 278 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 ITIH5Q86UX2 942 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 GPD1LQ8N335 351 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 TTC9BQ8N6N2 239 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 LRRC52Q8N7C0 313 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 C1orf127Q8N9H9 656 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 ZSCAN18Q8TBC5 510 aaPredicted RBP10.57□□□□□ -0.72
CCL28-203ENST00000513525 SPATA18Q8TC71 538 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 IRF7Q92985 503 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 NKD2Q969F2 451 aaPredicted RBP10.57□□□□□ -0.72
CCL28-203ENST00000513525 ZSWIM3Q96MP5 696 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 CBWD1Q9BRT8 395 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 TRMT61BQ9BVS5 477 aaKnown RBP10.57□□□□□ -0.72
CCL28-203ENST00000513525 SEMA4AQ9H3S1 761 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 BRD9Q9H8M2 597 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 RWDD2AQ9UIY3 292 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 ITGA11Q9UKX5 1188 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 PYCARDQ9ULZ3 195 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
CCL28-203ENST00000513525 A0A1W2PRU2 124 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 SHISA7A6NL88 538 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 NRDCO43847 1150 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 LRRN2O75325 713 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 ITGB3P05106 788 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 GJA1P17302 382 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 ATF6P18850 670 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 POLR2BP30876 1174 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms