RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SHC3Q92529 594 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 KAT5Q92993 513 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 KREMEN1Q96MU8 473 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 GUCD1Q96NT3 240 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 KLHL5Q96PQ7 755 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 CDX2Q99626 313 aaPredicted RBP8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 ZCWPW1Q9H0M4 648 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 TLE6Q9H808 572 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 UBE2TQ9NPD8 197 aaPredicted RBP8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 MTMR10Q9NXD2 777 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 CEP72Q9P209 647 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 HMGXB4Q9UGU5 601 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 DNAJC12Q9UKB3 198 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 NME7Q9Y5B8 376 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 PCDHB4Q9Y5E5 795 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 MTMR11A4FU01 709 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ADAM12O43184 909 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 TGM5O43548 720 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 HCRTO43612 131 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 CLASP2O75122 1294 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 NOL4O94818 638 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ABLIM3O94929 683 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 PAEPP09466 180 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 PDGFRBP09619 1106 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 OR4Q2P0C623 313 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 SRGAP2BP0DMP2 458 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ATF2P15336 505 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 FOSL2P15408 326 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ACO1P21399 889 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 IGFBP4P22692 258 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 NRIP1P48552 1158 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 CLCN4P51793 760 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 RAD23BP54727 409 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ARPP19P56211 112 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 POLR2FP61218 127 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 PSMC1P62191 440 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 APBA1Q02410 837 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 RAPGEF1Q13905 1077 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 TRIM14Q14142 442 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 DRAP1Q14919 205 aaPredicted RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ARHGAP44Q17R89 818 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC39A12Q504Y0 691 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 TCEAL5Q5H9L2 206 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 FIGNQ5HY92 759 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 FAM171BQ6P995 826 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 RSPO2Q6UXX9 243 aaPredicted RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 C4orf50Q6ZRC1 276 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 CACNA2D4Q7Z3S7 1137 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 FMNL3Q8IVF7 1028 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 CRYBG2Q8N1P7 616 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 RBBP8NLQ8NC74 664 aaPredicted RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF461Q8TAF7 563 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 SPPL2BQ8TCT7 592 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 C2orf15Q8WU43 125 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 MYLIPQ8WY64 445 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 TMEM176AQ96HP8 235 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 FUBP3Q96I24 572 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 SPAG5Q96R06 1193 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 TWNKQ96RR1 684 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 TMEM209Q96SK2 561 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 PKMYT1Q99640 499 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 NAA15Q9BXJ9 866 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 STK33Q9BYT3 514 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 DPEP3Q9H4B8 488 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 NLRC4Q9NPP4 1024 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 CRTAC1Q9NQ79 661 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 AFF4Q9UHB7 1163 aaKnown RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 DPP7Q9UHL4 492 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 FBXW11Q9UKB1 542 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 AJAP1Q9UKB5 411 aaPredicted RBP8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 MAFFQ9ULX9 164 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 CNTN6Q9UQ52 1028 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 HCFC2Q9Y5Z7 792 aa8.07□□□□□ -1.12
HMGXB3-204ENST00000513318 ATP8B3O60423 1300 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MYO10Q9HD67 2058 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MYBPHLA2RUH7 354 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 GOLGA6L3A6NEY3 463 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 F8VZ95 297 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 EPHB6O15197 1021 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 AP5Z1O43299 807 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 NCK2O43639 380 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 KRT5P13647 590 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 PTPN1P18031 435 aaKnown RBP8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ELF1P32519 619 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF132P52740 706 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 JAM2P57087 298 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 HYAL1Q12794 435 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 STILQ15468 1287 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 CFAP221Q4G0U5 840 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF394Q53GI3 561 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MDH1BQ5I0G3 518 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 LIN9Q5TKA1 542 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 SPECC1LQ69YQ0 1117 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 LILRA6Q6PI73 481 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 RNF19BQ6ZMZ0 732 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms