RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 UPP1Q16831 310 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 CD300LGQ6UXG3 332 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 VN1R5Q7Z5H4 357 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 GRASPQ7Z6J2 395 aaPredicted RBP10.3□□□□□ -0.76
TRIO-220ENST00000512979 FAM35AQ86V20 835 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 SULF2Q8IWU5 870 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 FAM169BQ8N8A8 192 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 STK35Q8TDR2 534 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 CDK5RAP3Q96JB5 506 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 SNX27Q96L92 541 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 DEPDC7Q96QD5 511 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 FERD3LQ96RJ6 166 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 PLIN2Q99541 437 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 TCHPQ9BT92 498 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 TIPINQ9BVW5 301 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 C17orf75Q9HAS0 396 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 MTRRQ9UBK8 725 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 SOX13Q9UN79 622 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 CYP8B1Q9UNU6 501 aa10.3□□□□□ -0.76
TRIO-220ENST00000512979 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 I3L4J1 428 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 PODXLO00592 558 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 CCL16O15467 120 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 TRAPPC3O43617 180 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 PLA2G4BP0C869 781 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 MCF2P10911 925 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 PLS3P13797 630 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 PROZP22891 400 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 TKTP29401 623 aaKnown RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 HOXA9P31269 272 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 OR1D2P34982 312 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 BRCC3P46736 316 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 MCM2P49736 904 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 PCBP4P57723 403 aaKnown RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 NTHL1P78549 312 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 SOX4Q06945 474 aaPredicted RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 STRN3Q13033 797 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 XKR4Q5GH76 650 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 HYIQ5T013 277 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 AXDND1Q5T1B0 1012 aaPredicted RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 ZNF468Q5VIY5 522 aaPredicted RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 MPZL3Q6UWV2 235 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 ALKAL1Q6UXT8 129 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 SYT2Q8N9I0 419 aaPredicted RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 ST13P5Q8NFI4 369 aaPredicted RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 SLC7A14Q8TBB6 771 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 GRIN3AQ8TCU5 1115 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 ZBTB45Q96K62 511 aaPredicted RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
TRIO-220ENST00000512979 ACAP3Q96P50 834 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 CBX8Q9HC52 389 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 SLC38A7Q9NVC3 462 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 ANKFY1Q9P2R3 1169 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 WNT16Q9UBV4 365 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 CA14Q9ULX7 337 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 SMC3Q9UQE7 1217 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 CDY1Q9Y6F8 540 aa10.29□□□□□ -0.76
TRIO-220ENST00000512979 NPHP3-ACAD11A0A0J9YXS1 232 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 FAM221BA6H8Z2 402 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 ANHXE9PGG2 379 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 ABLIM1O14639 778 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 PI15O43692 258 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 SIN3BO75182 1162 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 CILPO75339 1184 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 TOM1L1O75674 476 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 SRFP11831 508 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 KCNE1P15382 129 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 AOC1P19801 751 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 HSD3B2P26439 372 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 GIPRP48546 466 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 ZNF165P49910 485 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 SLC12A3P55017 1021 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 HTR4Q13639 388 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 NOLC1Q14978 699 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRIO-220ENST00000512979 TMEM119Q4V9L6 283 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 ARL6IP4Q66PJ3 421 aaKnown RBP10.28□□□□□ -0.76
TRIO-220ENST00000512979 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 RSPO2Q6UXX9 243 aaPredicted RBP10.28□□□□□ -0.76
TRIO-220ENST00000512979 TMEM161BQ8NDZ6 487 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 RTP3Q9BQQ7 232 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 NTPCRQ9BSD7 190 aaKnown RBP10.28□□□□□ -0.76
TRIO-220ENST00000512979 KCNG1Q9UIX4 513 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 CDH7Q9ULB5 785 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 BACE2Q9Y5Z0 518 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 NUMBLQ9Y6R0 609 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 DOCK8Q8NF50 2099 aa10.28□□□□□ -0.76
TRIO-220ENST00000512979 MTCL1Q9Y4B5 1905 aaKnown RBP10.28□□□□□ -0.76
TRIO-220ENST00000512979 VWA8A3KMH1 1905 aa10.27□□□□□ -0.76
TRIO-220ENST00000512979 CDC14CA4D256 554 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 POU2F2P09086 479 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
TRIO-220ENST00000512979 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRIO-220ENST00000512979 LRRC14Q15048 493 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 UVSSAQ2YD98 709 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 PERM1Q5SV97 790 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 LARP1BQ659C4 914 aaKnown RBP10.27□□□□□ -0.77
TRIO-220ENST00000512979 PARM1Q6UWI2 310 aa10.27□□□□□ -0.77
TRIO-220ENST00000512979 ZPBP2Q6X784 338 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms