RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 MCRS1Q96EZ8 462 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 BICD1Q96G01 975 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 AK8Q96MA6 479 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ZMAT2Q96NC0 199 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 TSPAN18Q96SJ8 248 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 KXD1Q9BQD3 176 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CORO1BQ9BR76 489 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 MMTAG2Q9BU76 263 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 RPP25Q9BUL9 199 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 DDX23Q9BUQ8 820 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 FOXQ1Q9C009 403 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 PLEKHA5Q9HAU0 1116 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CYP4F11Q9HBI6 524 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 HCFC1R1Q9NWW0 138 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 DLGAP2Q9P1A6 1054 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ZFATQ9P243 1243 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ANKFY1Q9P2R3 1169 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 FBXL5Q9UKA1 691 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 MRPS17Q9Y2R5 130 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 INSL5Q9Y5Q6 135 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 DMXL1Q9Y485 3027 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 F5P12259 2224 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 WDR27A2RRH5 827 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 VWA3AA6NCI4 1184 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 FAM170BA6NMN3 283 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 LAMTOR5O43504 91 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 DYRK3O43781 588 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 TBC1D4O60343 1298 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 KINO60870 393 aaKnown RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 BMP15O95972 392 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 H2AFB1P0C5Y9 115 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 H2AFB2P0C5Z0 115 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 PLA2G4BP0C869 781 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 SP9P0CG40 484 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 RARAP10276 462 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 CPB1P15086 417 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 CYP3A5P20815 502 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 PAX3P23760 479 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ID4P47928 161 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 MCM2P49736 904 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 NRLP54845 237 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 MCL1Q07820 350 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 RAD51AP2Q09MP3 1159 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 PLD1Q13393 1074 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 MRPL58Q14197 206 aaKnown RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 IL17AQ16552 155 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 SLC10A6Q3KNW5 377 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ZNF528Q3MIS6 628 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ZBTB41Q5SVQ8 909 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ZNF852Q6ZMS4 543 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ERMP1Q7Z2K6 904 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 KCNK18Q7Z418 384 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 USP37Q86T82 979 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ST13P5Q8NFI4 369 aaPredicted RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 DNASE1L2Q92874 299 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 C18orf25Q96B23 403 aaPredicted RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 ELSPBP1Q96BH3 223 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 CALML4Q96GE6 196 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ZBTB45Q96K62 511 aaPredicted RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 ZNF512Q96ME7 567 aaPredicted RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 TBC1D32Q96NH3 1257 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 KIF2CQ99661 725 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 UPF2Q9HAU5 1272 aaKnown RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 SPATA6Q9NWH7 488 aaPredicted RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 AFF4Q9UHB7 1163 aaKnown RBP7.81□□□□□ -1.16
USP46-208ENST00000512656 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 ODF2LQ9ULJ1 636 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 R4GN57 208 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 NCOR2Q9Y618 2525 aa7.81□□□□□ -1.16
USP46-208ENST00000512656 OR6C75A6NL08 312 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 MAN2B1O00754 1011 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 ABLIM1O14639 778 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 HNRNPDLO14979 420 aaKnown RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 FAM13AO94988 1023 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 CEBPBP17676 345 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 IGFBP6P24592 240 aaPredicted RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 TARSP26639 723 aaKnown RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 LRPAP1P30533 357 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 UBA7P41226 1012 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 RPS9P46781 194 aaKnown RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 LIG4P49917 911 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 SLC12A3P55017 1021 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 NCKAP1LP55160 1127 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 YWHAHQ04917 246 aaPredicted RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 ADCY1Q08828 1119 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 SLC5A9Q2M3M2 681 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 TPRG1Q6ZUI0 275 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 HAUS6Q7Z4H7 955 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 CD302Q8IX05 232 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 RASSF8Q8NHQ8 419 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 ATRIPQ8WXE1 791 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 RUBCNQ92622 972 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 KCNN1Q92952 543 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 E2F7Q96AV8 911 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 TRMT61BQ9BVS5 477 aaKnown RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 GPR88Q9GZN0 384 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 BRD9Q9H8M2 597 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 ZFP14Q9HCL3 533 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms