RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 CCL26Q9Y258 94 aa15.78■□□□□ 0.12
CCHCR1-229ENST00000512418 CUTAO60888 179 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 ASIC1P78348 528 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 DDR2Q16832 855 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 DUOXA2Q1HG44 320 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 SDHAF4Q5VUM1 108 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 LMBRD2Q68DH5 695 aaPredicted RBP15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 TXNDC8Q6A555 127 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 LAIR1Q6GTX8 287 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 CNNM4Q6P4Q7 775 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 MON1AQ86VX9 555 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 OSTM1Q86WC4 334 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 SPATA2LQ8IUW3 424 aaPredicted RBP15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 WDR49Q8IV35 697 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 IQUBQ8NA54 791 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 STKLD1Q8NE28 680 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 OR5B17Q8NGF7 314 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 DHX58Q96C10 678 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 HPDLQ96IR7 371 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 MYRFLQ96LU7 910 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
CCHCR1-229ENST00000512418 K7ESF4 209 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 TADA3O75528 432 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 SDHBP21912 280 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 CNR2P34972 360 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 HOXD13P35453 343 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 LMNB2Q03252 620 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 RUNX3Q13761 415 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 ZNF268Q14587 947 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 CCDC142Q17RM4 750 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 RSPO4Q2I0M5 234 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 FAM26FQ5R3K3 315 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 CC2D1AQ6P1N0 951 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 C4orf50Q6ZRC1 276 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 LIMS2Q7Z4I7 341 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 LONP2Q86WA8 852 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 EBF3Q9H4W6 596 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 MAGEF1Q9HAY2 307 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 HPS4Q9NQG7 708 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 USP18Q9UMW8 372 aa15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 ZNF638Q14966 1978 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-229ENST00000512418 UBE4BO95155 1302 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 PRR5-ARHGAP8B1AHC4 643 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 CHURC1-FNTBB4DL54 471 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 HCRTO43612 131 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 HOXA6P31267 233 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 MAGEA11P43364 429 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 FNTBP49356 437 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 ARHGAP8P85298 464 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 AMPD2Q01433 879 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 FAM160A1Q05DH4 1040 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 DMWDQ09019 674 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 SNRNP35Q16560 246 aaKnown RBP15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 LPAL2Q16609 132 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 TRIM68Q6AZZ1 485 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 FAM171BQ6P995 826 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 SHC4Q6S5L8 630 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 PRR23BQ6ZRT6 265 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 ZNF507Q8TCN5 953 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 KBTBD7Q8WVZ9 684 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 C7orf25Q9BPX7 421 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 SYT15Q9BQS2 421 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
CCHCR1-229ENST00000512418 TRAV19A0A0A6YYK7 116 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 OTOL1A6NHN0 477 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 TGFB1I1O43294 461 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 LRP3O75074 770 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 RETP07949 1114 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 TGM1P22735 817 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 GRSF1Q12849 480 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 SIM2Q14190 667 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 MTF1Q14872 753 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 PDGFRLQ15198 375 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 TMEM196Q5HYL7 178 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 SCN4BQ8IWT1 228 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 FSIP1Q8NA03 581 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 RIN3Q8TB24 985 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 SNX21Q969T3 373 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 CHFRQ96EP1 664 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 CEP295NLQ96MC4 621 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 FNBP1Q96RU3 617 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 TRPC7Q9HCX4 862 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 C2orf42Q9NWW7 574 aa15.74■□□□□ 0.11
CCHCR1-229ENST00000512418 MED19A0JLT2 244 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 TRDMT1O14717 391 aaKnown RBP15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 HRO43593 1189 aa15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 CKMP06732 381 aa15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 USP17L7P0C7H9 530 aa15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 ARSAP15289 507 aa15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 WARSP23381 471 aaKnown RBP15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 LMO2P25791 158 aa15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 PSMC1P62191 440 aaKnown RBP15.73■□□□□ 0.11
CCHCR1-229ENST00000512418 SNRPFP62306 86 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms