RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	SATB1	Q01826	763 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	SLC13A2	Q13183	592 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	RBM20	Q5T481	1227 aa	Known RBP	6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	TMEM108	Q6UXF1	575 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	SLC15A4	Q8N697	577 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	FBXL20	Q96IG2	436 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	LRRC27	Q9C0I9	530 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	IKZF4	Q9H2S9	585 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	SACM1L	Q9NTJ5	587 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	LRIT1	Q9P2V4	623 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	MAGI3	Q5TCQ9	1506 aa		6.99	□□□□□ -1.29
LINC01088-208	ENST00000511895	TBX3	O15119	743 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	ESRRB	O95718	433 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	ATXN1L	P0C7T5	689 aa	Known RBP	6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	RHCE	P18577	417 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	EN2	P19622	333 aa	Predicted RBP	6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	PEX2	P28328	305 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	PXN	P49023	591 aa	Predicted RBP	6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	SUMO3	P55854	103 aa	Predicted RBP	6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	LILRA4	P59901	499 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	MRPS35	P82673	323 aa	Known RBP	6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	RHD	Q02161	417 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	FOXI1	Q12951	378 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	CTBP1	Q13363	440 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	RAB32	Q13637	225 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	SLC44A4	Q53GD3	710 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	VWA1	Q6PCB0	445 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	CCAR1	Q8IX12	1150 aa	Known RBP	6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	ANKS1A	Q92625	1134 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	SUCLG2	Q96I99	432 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	BHMT2	Q9H2M3	363 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	TOR3A	Q9H497	397 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	CPNE7	Q9UBL6	633 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	OGDHL	Q9ULD0	1010 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	PCDHGB6	Q9Y5F9	930 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	MAST3	O60307	1309 aa		6.98	□□□□□ -1.29
LINC01088-208	ENST00000511895	TOP2A	P11388	1531 aa	Known RBP	6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	KIF3B	O15066	747 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	DCLK1	O15075	740 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	MAP4K4	O95819	1239 aa	Predicted RBP	6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	HRG	P04196	525 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	CHRM2	P08172	466 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	ZKSCAN1	P17029	563 aa	Predicted RBP	6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	PLA2G5	P39877	138 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	MPL	P40238	635 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	ZNF134	P52741	427 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	ARFIP2	P53365	341 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	POLD3	Q15054	466 aa	Predicted RBP	6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	MYCBPAP	Q8TBZ2	947 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	TTC17	Q96AE7	1141 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	OSBPL9	Q96SU4	736 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	ACTRT3	Q9BYD9	372 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	KIAA1586	Q9HCI6	787 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	DMRT1	Q9Y5R6	373 aa		6.97	□□□□□ -1.29
LINC01088-208	ENST00000511895	ARAP3	Q8WWN8	1544 aa		6.96	□□□□□ -1.29
LINC01088-208	ENST00000511895	TTC37	Q6PGP7	1564 aa		6.96	□□□□□ -1.29
LINC01088-208	ENST00000511895	MYO1F	O00160	1098 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	VIPR2	P41587	438 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	LOXL3	P58215	753 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	ITIH3	Q06033	890 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	GALE	Q14376	348 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	VPS53	Q5VIR6	699 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	ACTRT2	Q8TDY3	377 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	FAM136A	Q96C01	138 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	PGBD1	Q96JS3	809 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	ZNF287	Q9HBT7	754 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	SHOC2	Q9UQ13	582 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	RUSC2	Q8N2Y8	1516 aa		6.96	□□□□□ -1.3
LINC01088-208	ENST00000511895	ISM1	B1AKI9	464 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	FRS3	O43559	492 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	CYP2C9	P11712	490 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	XRCC6	P12956	609 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	MYF5	P13349	255 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	CXCR5	P32302	372 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	FOLR3	P41439	243 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	HNRNPM	P52272	730 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	NXPH1	P58417	271 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	KRT17	Q04695	432 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	CNGA2	Q16280	664 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	GPR150	Q8NGU9	434 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	RAPGEF4	Q8WZA2	1011 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	TFAP2B	Q92481	460 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	APIP	Q96GX9	242 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	APOL5	Q9BWW9	433 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	AMBRA1	Q9C0C7	1298 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	ZSCAN32	Q9NX65	697 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	FAM50B	Q9Y247	325 aa		6.95	□□□□□ -1.3
LINC01088-208	ENST00000511895	FHAD1	B1AJZ9	1412 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895		A0A087WWL8	130 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	TMEM233	B4DJY2	109 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	PROM1	O43490	865 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	TOM1	O60784	492 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	ADRA1B	P35368	520 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	SEMA5A	Q13591	1074 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	ERCC6L	Q2NKX8	1250 aa		6.94	□□□□□ -1.3
LINC01088-208	ENST00000511895	ARHGAP40	Q5TG30	622 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms