RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 PCDHB5Q9Y5E4 795 aa14.27□□□□□ -0.13
POLR2J3-216ENST00000511773 PTPRDP23468 1912 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TRAV19A0A0A6YYK7 116 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 PIRO00625 290 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 MAP3K13O43283 966 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 PRPF40AO75400 957 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TADA3O75528 432 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 CKMP06732 381 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TRAPPC10P48553 1259 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 FAM160A1Q05DH4 1040 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 ZNF268Q14587 947 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 ZNF77Q15935 545 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 IL17AQ16552 155 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 DDR2Q16832 855 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 EML3Q32P44 896 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 LPCAT2Q7L5N7 544 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TMEFF1Q8IYR6 380 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 DCP1BQ8IZD4 617 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 USP33Q8TEY7 942 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TSPAN18Q96SJ8 248 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 NUSAP1Q9BXS6 441 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 FSCN3Q9NQT6 498 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 MSRB2Q9Y3D2 182 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 TNRC6BQ9UPQ9 1833 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 PCNX2A6NKB5 2137 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 PI4KAP42356 2102 aa14.26□□□□□ -0.13
POLR2J3-216ENST00000511773 ANO9A1A5B4 782 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 H0YCG3 227 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 K7ENM7 598 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 CFIP05156 583 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 USP17L7P0C7H9 530 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 CSH1P0DML2 217 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 CSH2P0DML3 217 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 ENGP17813 658 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 PAX3P23760 479 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 PTGER3P43115 390 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 ACOT2P49753 483 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 TAF6P49848 677 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 NCKAP1LP55160 1127 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 ANAPC15P60006 121 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 SMARCB1Q12824 385 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 USP4Q13107 963 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 ZC2HC1CQ53FD0 456 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 CD302Q8IX05 232 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 FRMD1Q8N878 549 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 LINC00597Q9H2U6 94 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 TMEM74BQ9NUR3 256 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 LARSQ9P2J5 1176 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 EVLQ9UI08 416 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 CPSF3Q9UKF6 684 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 ADAMTS9Q9P2N4 1935 aa14.25□□□□□ -0.13
POLR2J3-216ENST00000511773 SMG1Q96Q15 3661 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 A0A0B4J269 797 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 K7EQS6 105 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 ADRB2P07550 413 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 PLA2G4BP0C869 781 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 CYP2F1P24903 491 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 TOB1P50616 345 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 NEK4P51957 841 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 SLC12A3P55017 1021 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 TSPY1Q01534 308 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 NR1H3Q13133 447 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 C19orf48Q6RUI8 117 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 DTHD1Q6ZMT9 781 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 CCDC83Q8IWF9 413 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 ARL14EPQ8N8R7 260 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 SYT2Q8N9I0 419 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 FBXO18Q8NFZ0 1043 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 CCDC26Q8TAB7 109 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 SH3RF2Q8TEC5 729 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 SPACA7Q96KW9 195 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 PNMA5Q96PV4 448 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 FNBP1Q96RU3 617 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 GTPBP2Q9BX10 602 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 TMEM206Q9H813 350 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 DPP3Q9NY33 737 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 UXTQ9UBK9 157 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 MMP17Q9ULZ9 603 aa14.24□□□□□ -0.13
POLR2J3-216ENST00000511773 ADAMTS20P59510 1910 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 C2orf78A6NCI8 922 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 TAF4O00268 1085 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 ALDH1A2O94788 518 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 SEC24BO95487 1268 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 NFATC1O95644 943 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 HNRNPLP14866 589 aaKnown RBP eCLIP14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 ACAT1P24752 427 aaKnown RBP14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 OPRD1P41143 372 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 KCNB1Q14721 858 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 CRY1Q16526 586 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 LYSMD4Q5XG99 296 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 SLC39A4Q6P5W5 647 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 SYT12Q8IV01 421 aa14.23□□□□□ -0.13
POLR2J3-216ENST00000511773 SFTPA1Q8IWL2 248 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms