RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 EFHBQ8N7U6 833 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 TMEM35BQ8NCS4 154 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 GSTCDQ8NEC7 633 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 SLC20A1Q8WUM9 679 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 ZNF606Q8WXB4 792 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 ZNF689Q96CS4 500 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-228ENST00000511676 TMEM176AQ96HP8 235 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 NECTIN4Q96NY8 510 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 NAPGQ99747 312 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-228ENST00000511676 NT5C1AQ9BXI3 368 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 TLE6Q9H808 572 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 NXF1Q9UBU9 619 aaKnown RBP9.67□□□□□ -0.86
NR1I3-228ENST00000511676 TUBGCP4Q9UGJ1 667 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 DNAI1Q9UI46 699 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 DSEQ9UL01 958 aa9.67□□□□□ -0.86
NR1I3-228ENST00000511676 SCN5AQ14524 2016 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 TRANK1O15050 2925 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CHD9Q3L8U1 2897 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 H3BQ06 376 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 THAP12O43422 761 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 MBTPS2O43462 519 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 HUS1O60921 280 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CLSTN1O94985 981 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 KIF4AO95239 1232 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 FTLP02792 175 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CYP1A2P05177 515 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CALB1P05937 261 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 MMEP08473 750 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 IL9P15248 144 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 LAG3P18627 525 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 WARSP23381 471 aaKnown RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 MLH1P40692 756 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 RAD23BP54727 409 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 SNX16P57768 344 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 LILRA4P59901 499 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 ADAM15Q13444 863 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 TUSC3Q13454 348 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CNGA2Q16280 664 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 LIN9Q5TKA1 542 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 PAPD7Q5XG87 772 aaKnown RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 C11orf63Q6NUN7 778 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CRYBG2Q8N1P7 616 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 APPL2Q8NEU8 664 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 URGCPQ8TCY9 931 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 PBXIP1Q96AQ6 731 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 C18orf25Q96B23 403 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 TNIP3Q96KP6 325 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 WDR24Q96S15 920 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 APOL6Q9BWW8 343 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 PHF7Q9BWX1 381 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-228ENST00000511676 CYLDQ9NQC7 956 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 RNF14Q9UBS8 474 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 STRIP2Q9ULQ0 834 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 SCINQ9Y6U3 715 aa9.66□□□□□ -0.86
NR1I3-228ENST00000511676 TET1Q8NFU7 2136 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MICAL3Q7RTP6 2002 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 CYP11A1P05108 521 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 WEE2P0C1S8 567 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 TCP1P17987 556 aaKnown RBP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MMP8P22894 467 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 LHX1P48742 406 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 ITIH3Q06033 890 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SOX4Q06945 474 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 DSC1Q08554 894 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 CLUL1Q15846 466 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 UPP1Q16831 310 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SOWAHAQ2M3V2 549 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 GLRA4Q5JXX5 417 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 ARHGAP17Q68EM7 881 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 LCLAT1Q6UWP7 414 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MON1BQ7L1V2 547 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SLFN11Q7Z7L1 901 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 UBALD2Q8IYN6 164 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MCOLN2Q8IZK6 566 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SLC35F6Q8N357 371 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 LRRC57Q8N9N7 239 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SLC4A11Q8NBS3 891 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 WHAMMQ8TF30 809 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 STK32AQ8WU08 396 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MMS19Q96T76 1030 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 PCDHB18PQ96TA0 734 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 GAD1Q99259 594 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MRPL9Q9BYD2 267 aaKnown RBP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 PDCL3Q9H2J4 239 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SMYD3Q9H7B4 428 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 MRPL47Q9HD33 250 aaKnown RBP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 TLR9Q9NR96 1032 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SEPT11Q9NVA2 429 aaKnown RBP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 WDR35Q9P2L0 1181 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 POLIQ9UNA4 740 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.65□□□□□ -0.86
NR1I3-228ENST00000511676 SNX9Q9Y5X1 595 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 XIRP2A4UGR9 3374 aa9.65□□□□□ -0.86
NR1I3-228ENST00000511676 CHD7Q9P2D1 2997 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms