RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 TJAP1Q5JTD0 557 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 LRSAM1Q6UWE0 723 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 VSTM1Q6UX27 236 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 ITIH5Q86UX2 942 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 JAKMIP2Q96AA8 810 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 VPS16Q9H269 839 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 HSD3B7Q9H2F3 369 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 APEX2Q9UBZ4 518 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 SLC27A5Q9Y2P5 690 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 NUP210Q8TEM1 1887 aaPredicted RBP13.69□□□□□ -0.22
COL6A6-203ENST00000511332 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 LGALS16A8MUM7 142 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 TRIM66O15016 1216 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 RFX1P22670 979 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 PON1P27169 355 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
COL6A6-203ENST00000511332 MFAP3P55082 362 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 CCDC142Q17RM4 750 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 SMYD5Q6GMV2 418 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 CRYBG2Q8N1P7 616 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 LEMD2Q8NC56 503 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 SMARCD1Q96GM5 515 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 CEP295NLQ96MC4 621 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
COL6A6-203ENST00000511332 MED10Q9BTT4 135 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 WDR6Q9NNW5 1121 aaKnown RBP13.68□□□□□ -0.22
COL6A6-203ENST00000511332 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
COL6A6-203ENST00000511332 HELZP42694 1942 aaKnown RBP13.67□□□□□ -0.22
COL6A6-203ENST00000511332 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 IL9P15248 144 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 ATF6P18850 670 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 SLC9A1P19634 815 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 CYP2F1P24903 491 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 ANXA13P27216 316 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 ORC1Q13415 861 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 PABPC1LQ4VXU2 614 aaKnown RBP13.67□□□□□ -0.22
COL6A6-203ENST00000511332 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 FAM35AQ86V20 835 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 LUZP1Q86V48 1076 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 UBR7Q8N806 425 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 WHAMMQ8TF30 809 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 TMEM176AQ96HP8 235 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
COL6A6-203ENST00000511332 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 NR2E1Q9Y466 385 aa13.67□□□□□ -0.22
COL6A6-203ENST00000511332 ANAPC1Q9H1A4 1944 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 SOAT2O75908 522 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 FGF19O95750 216 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 PTPN2P17706 415 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 BDNFP23560 247 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 CDR1P51861 262 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 RAD23BP54727 409 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 ZNF445P59923 1031 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 TAF12Q16514 161 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 FILIP1LQ4L180 1135 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 TMEM270Q6UE05 265 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 PDZD4Q76G19 769 aaPredicted RBP13.66□□□□□ -0.22
COL6A6-203ENST00000511332 GRASPQ7Z6J2 395 aaPredicted RBP13.66□□□□□ -0.22
COL6A6-203ENST00000511332 SCN4BQ8IWT1 228 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 SLC4A11Q8NBS3 891 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 SLC2A14Q8TDB8 520 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 PSMG2Q969U7 264 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 B3GNT5Q9BYG0 378 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 ZNF518BQ9C0D4 1074 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
COL6A6-203ENST00000511332 DMAP1Q9NPF5 467 aaPredicted RBP13.66□□□□□ -0.22
COL6A6-203ENST00000511332 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
COL6A6-203ENST00000511332 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 FAM49BQ9NUQ9 324 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 HCFC1R1Q9NWW0 138 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 CEP72Q9P209 647 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 CDH22Q9UJ99 828 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 PCDHB4Q9Y5E5 795 aa13.66□□□□□ -0.22
COL6A6-203ENST00000511332 CLDN5O00501 218 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 RHOP08100 348 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 PAEPP09466 180 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 CSH1P0DML2 217 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 CSH2P0DML3 217 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 BMP1P13497 986 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 CCDC130P13994 396 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 ACO1P21399 889 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms