RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 MAGEA11P43364 429 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC39A12Q504Y0 691 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 ISM2Q6H9L7 571 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC36A4Q6YBV0 504 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 C1orf186Q6ZWK4 172 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 RBBP8NLQ8NC74 664 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 RPGRIP1Q96KN7 1286 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 STK33Q9BYT3 514 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 TASP1Q9H6P5 420 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 CACYBPQ9HB71 228 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 MAN1B1Q9UKM7 699 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 CFAP69A5D8W1 941 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 LACTBL1A8MY62 500 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 LILRB3O75022 631 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 S100BP04271 92 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 OXTRP30559 389 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 CCR1P32246 355 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 DNA2P51530 1060 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 FANCCQ00597 558 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 SGCGQ13326 291 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 HSP90B2PQ58FF3 399 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 SPECC1LQ69YQ0 1117 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 RWDD4Q6NW29 188 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 OOSP2Q86WS3 158 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 SEC24BO95487 1268 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 FMO5P49326 533 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 PIGHQ14442 188 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 MRPL10Q7Z7H8 261 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 FAM228AQ86W67 206 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 GLYCTKQ8IVS8 523 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 MAB21L3Q8N8X9 362 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 PLD4Q96BZ4 506 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 TMA16Q96EY4 203 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 C16orf70Q9BSU1 422 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 DNAJC25Q9H1X3 360 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 GDPD2Q9HCC8 539 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 SAMD15Q9P1V8 674 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 NFICP08651 508 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 KCNA5P22460 613 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 PRKCQQ04759 706 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC20A2Q08357 652 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 GOLGA7BQ2TAP0 167 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 BOLA3Q53S33 107 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 DLK2Q6UY11 383 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 CYFIP2Q96F07 1278 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 PANX2Q96RD6 677 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 NTPCRQ9BSD7 190 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 RUSC1Q9BVN2 902 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 NAV1Q8NEY1 1877 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 TMEM110-MUSTN1A8MSY1 372 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 TMEM189-UBE2V1I3L0A0 370 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 ATP9AO75110 1047 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 HOXA9P31269 272 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 RPIAP49247 311 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 TPI1P60174 286 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 SPON2Q9BUD6 331 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 FRMD8P1Q9BZ68 369 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 KBTBD4Q9NVX7 518 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 APEX2Q9UBZ4 518 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 TRAF3IP3Q9Y228 551 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 USTQ9Y2C2 406 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 A0A1W2PQC6 194 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC12A8A0AV02 714 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 CXCL8P10145 99 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 HOXD8P13378 290 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 PTPN1P18031 435 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 CASQ1P31415 396 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 SULT1E1P49888 294 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 DUSP3P51452 185 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 RNASE9P60153 205 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 GCNT1Q02742 428 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 ACAP1Q15027 740 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 TMEM240Q5SV17 173 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 PRPF39Q86UA1 669 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 LENG9Q96B70 501 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 SNX27Q96L92 541 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 BPIFA3Q9BQP9 254 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 KRT82Q9NSB4 513 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 ERVW-1Q9UQF0 538 aa10.15□□□□□ -0.78
POLR2J3-215ENST00000511313 H3BM21 787 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 CA3P07451 260 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 HNRNPDQ14103 355 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 PTCRAQ6ISU1 281 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 TSTD1Q8NFU3 115 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 OBP2AQ9NY56 170 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 UVRAGQ9P2Y5 699 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 VAV3Q9UKW4 847 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 GOLGA8SH3BPF8 625 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 IRAK2O43187 625 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 CXCL10P02778 98 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 DNTTP04053 509 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 GLULP15104 373 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 GABRR2P28476 465 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms