RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ATAD1Q8NBU5 361 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 CCDC150Q8NCX0 1101 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 LMO3Q8TAP4 145 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 LNX1Q8TBB1 728 aaPredicted RBP5.77□□□□□ -1.49
PROM1-211ENST00000511153 SUSD3Q96L08 255 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 GUCD1Q96NT3 240 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 CDX2Q99626 313 aaPredicted RBP5.77□□□□□ -1.49
PROM1-211ENST00000511153 MED10Q9BTT4 135 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 NIF3L1Q9GZT8 377 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 ZBP1Q9H171 429 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 PLCB1Q9NQ66 1216 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 PRDM6Q9NQX0 595 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 MRPL17Q9NRX2 175 aaKnown RBP5.77□□□□□ -1.49
PROM1-211ENST00000511153 CISHQ9NSE2 258 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 ABI2Q9NYB9 513 aaPredicted RBP5.77□□□□□ -1.49
PROM1-211ENST00000511153 FBXL5Q9UKA1 691 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 GTF3C4Q9UKN8 822 aa5.77□□□□□ -1.49
PROM1-211ENST00000511153 A0A1B0GTH6 734 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 GOLGA6L3A6NEY3 463 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 C2orf71A6NGG8 1288 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TEX28O15482 410 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CYP26A1O43174 497 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TRAPPC3O43617 180 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 N4BP1O75113 896 aaKnown RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 GFPT2O94808 682 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 NOL4O94818 638 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CTSAP10619 480 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 FGFR3P22607 806 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 BRD2P25440 801 aaKnown RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 PPM1AP35813 382 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 PNPLA4P41247 253 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 AP3M2P53677 418 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 PLCB3Q01970 1234 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CETN1Q12798 172 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CUL2Q13617 745 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 SMC1AQ14683 1233 aaKnown RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 DRAP1Q14919 205 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 NR1I3Q14994 352 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CT47A1Q5JQC4 288 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 KLHDC7AQ5VTJ3 777 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 DPY19L2P1Q6NXN4 242 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TMEM270Q6UE05 265 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 BPHLQ86WA6 291 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 NT5DC4Q86YG4 428 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 PASD1Q8IV76 773 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 SCN4BQ8IWT1 228 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 DRC7Q8IY82 874 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 LRRC52Q8N7C0 313 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 RBBP8NLQ8NC74 664 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 VN1R2Q8NFZ6 395 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 NEK11Q8NG66 645 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 UBA3Q8TBC4 463 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 GIPC2Q8TF65 315 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 SLC22A17Q8WUG5 538 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TMEM174Q8WUU8 243 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 HEXIM2Q96MH2 286 aaKnown RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 KLHL5Q96PQ7 755 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 UCN2Q96RP3 112 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 SEPT5Q99719 369 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 SYT15Q9BQS2 421 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CLSTN3Q9BQT9 956 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CRISPLD1Q9H336 500 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TLE6Q9H808 572 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 BARX2Q9UMQ3 279 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 SIK3Q9Y2K2 1263 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 MTCH2Q9Y6C9 303 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TRANK1O15050 2925 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 WDR27A2RRH5 827 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 C5orf67F2Z3F1 127 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 TMEM189-UBE2V1I3L0A0 370 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 M0QZQ0 153 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 PRRG1O14668 218 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 FSCN2O14926 492 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CCL16O15467 120 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CLASP2O75122 1294 aaKnown RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 RFPL2O75678 378 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 SEC24AO95486 1093 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 ADCY5O95622 1261 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 RB1P06400 928 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 SKILP12757 684 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 P4HA1P13674 534 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 FOSL2P15408 326 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 BDNFP23560 247 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CYP2F1P24903 491 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 ATICP31939 592 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 AARSP49588 968 aaKnown RBP eCLIP5.76□□□□□ -1.49
PROM1-211ENST00000511153 ZNF75DP51815 510 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 CACNA2D1P54289 1103 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 RAD23BP54727 409 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 POU5F1Q01860 360 aaKnown RBP5.76□□□□□ -1.49
PROM1-211ENST00000511153 ROR1Q01973 937 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 DSG1Q02413 1049 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 ADCY1Q08828 1119 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 HYAL1Q12794 435 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 DUSP4Q13115 394 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 ARID5BQ14865 1188 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 MGAT5BQ3V5L5 792 aa5.76□□□□□ -1.49
PROM1-211ENST00000511153 FOXR2Q6PJQ5 311 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms