RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TRPC7Q9HCX4 862 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 DDX43Q9NXZ2 648 aaKnown RBP11.2□□□□□ -0.62
DDX41-211ENST00000510171 AGAP1Q9UPQ3 857 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 BCLAF3A2AJT9 711 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 C4orf47A7E2U8 309 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 HUS1O60921 280 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 BMP15O95972 392 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 CKMP06732 381 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 PROS1P07225 676 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 ACAT1P24752 427 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 ADSSP30520 456 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 POLR2BP30876 1174 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 GBP1P32455 592 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 LONP1P36776 959 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 DGKEP52429 567 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 TFAMQ00059 246 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 MYL7Q01449 175 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 USP39Q53GS9 565 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 DAB2IPQ5VWQ8 1189 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 C11orf74Q86VG3 221 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 ARL14EPQ8N8R7 260 aaPredicted RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 FSIP1Q8NA03 581 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 CACTINQ8WUQ7 758 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 HVCN1Q96D96 273 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 TRMT2BQ96GJ1 504 aaKnown RBP11.19□□□□□ -0.62
DDX41-211ENST00000510171 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 IKZF4Q9H2S9 585 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 TMEM206Q9H813 350 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 GTF3C4Q9UKN8 822 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 L1RE1Q9UN81 338 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 INVSQ9Y283 1065 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 WNT6Q9Y6F9 365 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 TRIP11Q15643 1979 aa11.19□□□□□ -0.62
DDX41-211ENST00000510171 KHNYNO15037 678 aaKnown RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 TADA3O75528 432 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 CD2BP2O95400 341 aaKnown RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 ITGB3P05106 788 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 HDCP19113 662 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 ZNF77Q15935 545 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 EML3Q32P44 896 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 DYMQ7RTS9 669 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 SPATA2LQ8IUW3 424 aaPredicted RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 TMEM86AQ8N2M4 240 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 CSGALNACT2Q8N6G5 542 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 C1orf127Q8N9H9 656 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 TSTD1Q8NFU3 115 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 SH3RF2Q8TEC5 729 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 LARP4BQ92615 738 aaKnown RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
DDX41-211ENST00000510171 SLC22A12Q96S37 553 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 PKMYT1Q99640 499 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 LINC00597Q9H2U6 94 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 GCNT4Q9P109 453 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 EXOC7Q9UPT5 735 aa11.18□□□□□ -0.62
DDX41-211ENST00000510171 GIPC1O14908 333 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 LDHAP00338 332 aaKnown RBP11.17□□□□□ -0.62
DDX41-211ENST00000510171 KRT19P08727 400 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 PCSK1P29120 753 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 LHX1P48742 406 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 WNT7BP56706 349 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 RBP5P82980 135 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 GRIN1Q05586 938 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 USP4Q13107 963 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 KCNB1Q14721 858 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 CFAP221Q4G0U5 840 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 LARP1BQ659C4 914 aaKnown RBP11.17□□□□□ -0.62
DDX41-211ENST00000510171 BRAPQ7Z569 592 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 SFR1Q86XK3 245 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 SCN4BQ8IWT1 228 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 LRRC52Q8N7C0 313 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 SPATA18Q8TC71 538 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 FUBP3Q96I24 572 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDX41-211ENST00000510171 ACCSQ96QU6 501 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 STRA6Q9BX79 667 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 MRPL44Q9H9J2 332 aaKnown RBP11.17□□□□□ -0.62
DDX41-211ENST00000510171 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 RBAKQ9NYW8 714 aaPredicted RBP11.17□□□□□ -0.62
DDX41-211ENST00000510171 ITGA11Q9UKX5 1188 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 ARHGAP26Q9UNA1 814 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 SNX9Q9Y5X1 595 aa11.17□□□□□ -0.62
DDX41-211ENST00000510171 KMT2BQ9UMN6 2715 aaPredicted RBP11.17□□□□□ -0.62
DDX41-211ENST00000510171 LNP1A1A4G5 178 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 C2orf78A6NCI8 922 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 GABRDO14764 452 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 PPP1R37O75864 691 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 NFATC1O95644 943 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 TCF3P15923 654 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 PDCP20941 246 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 MAGEA11P43364 429 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 PDE6CP51160 858 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 SEC13P55735 322 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 KCNA1Q09470 495 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 FOXC1Q12948 553 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 C2orf27AQ580R0 203 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms