RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 EIF3BP55884 814 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 HUNKP57058 714 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 COPS2P61201 443 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 SLC25A11Q02978 314 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 NFX1Q12986 1120 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 PIGHQ14442 188 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 HIC1Q14526 733 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 STILQ15468 1287 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 TAF1CQ15572 869 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 CCNG2Q16589 344 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 TAZQ16635 292 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 KCTD19Q17RG1 926 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 KIZQ2M2Z5 673 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 PKDCCQ504Y2 493 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 CYP4A22Q5TCH4 519 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 CST9Q5W186 159 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 NOTUMQ6P988 496 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 DRICH1Q6PGQ1 229 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 DCUN1D2Q6PH85 259 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 RHBDF2Q6PJF5 856 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 C17orf99Q6UX52 265 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 LEKR1Q6ZMV7 388 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 CATSPER4Q7RTX7 472 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 HOOK3Q86VS8 718 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 ERICH1Q86X53 443 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 XYLT1Q86Y38 959 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 CCDC50Q8IVM0 306 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 RCOR2Q8IZ40 523 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 LRRC52Q8N7C0 313 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 OR2W6PQ8NHA6 318 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 IPO4Q8TEX9 1081 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 GRK7Q8WTQ7 553 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 UBLCP1Q8WVY7 318 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 C1orf54Q8WWF1 131 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 MCRS1Q96EZ8 462 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 SNF8Q96H20 258 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 TMEM176AQ96HP8 235 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 CPXM1Q96SM3 734 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 OSMRQ99650 979 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 FAM49AQ9H0Q0 323 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 PABPC3Q9H361 631 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 RRAGCQ9HB90 399 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 AAASQ9NRG9 546 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 KLHL11Q9NVR0 708 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 DPP3Q9NY33 737 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 DDX56Q9NY93 547 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 WDR35Q9P2L0 1181 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 TJP2Q9UDY2 1190 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 MTRF1LQ9UGC7 380 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 AGAP1Q9UPQ3 857 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 USTQ9Y2C2 406 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 ATP8A1Q9Y2Q0 1164 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 PTPN22Q9Y2R2 807 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 Q9Y3F1 56 aa5.03□□□□□ -1.6
PDLIM5-214ENST00000510099 C3orf70A6NLC5 250 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 SRRM3A6NNA2 597 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 A6NNZ2 444 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 F8VP50 259 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 PI4K2BG5E9Z4 385 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 GOLGA8SH3BPF8 625 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 PPEF2O14830 753 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 EIF3HO15372 352 aaKnown RBP eCLIP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 DYNC1LI2O43237 492 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 RIPK2O43353 540 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 LIASO43766 372 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 LRCH4O75427 683 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 RECQL4O94761 1208 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 IVLP07476 585 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 SETSIPP0DME0 302 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 KRT3P12035 628 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 RARGP13631 454 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 ATF2P15336 505 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 KLRC2P26717 231 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 CETN2P41208 172 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 CDKN2BP42772 138 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 GPD2P43304 727 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 SSR1P43307 286 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 NDST1P52848 882 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 PMS2P54278 862 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 YARSP54577 528 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 VCPP55072 806 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 PSMC1P62191 440 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 CAV1Q03135 178 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 MYO1EQ12965 1108 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 CALCOCO2Q13137 446 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 ORC1Q13415 861 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 ZNF268Q14587 947 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 SLMAPQ14BN4 828 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 SNX17Q15036 470 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 PPP1R7Q15435 360 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 ZBTB6Q15916 424 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 CNGA2Q16280 664 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 CCL14Q16627 93 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 ZSCAN26Q16670 478 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 GOLGA7BQ2TAP0 167 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 KRT71Q3SY84 523 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 TUBB8Q3ZCM7 444 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 XKR4Q5GH76 650 aa5.02□□□□□ -1.61
PDLIM5-214ENST00000510099 PRAMEF19Q5SWL8 479 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms