RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TAF12Q16514 161 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 CCDC157Q569K6 752 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 TXNDC8Q6A555 127 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 SFTPA1Q8IWL2 248 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 TPH2Q8IWU9 490 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 CEP120Q8N960 986 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
SNF8-207ENST00000509995 GAREM1Q9H706 876 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 ANKEF1Q9NU02 776 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 KCNK4Q9NYG8 393 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 VPS54Q9P1Q0 977 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 BTBD3Q9Y2F9 522 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 PCDHGB2Q9Y5G2 931 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 MYOFQ9NZM1 2061 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 TNFSF14O43557 240 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
SNF8-207ENST00000509995 NFATC1O95644 943 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 F11P03951 625 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 GP1BBP13224 206 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 GABRG2P18507 467 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 LIG1P18858 919 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 ADSSP30520 456 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 HNF1BP35680 557 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 GRM5P41594 1212 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
SNF8-207ENST00000509995 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 CCDC173Q0VFZ6 552 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 KCNH2Q12809 1159 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 SYCP2LQ5T4T6 812 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 NCAPH2Q6IBW4 605 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 USP37Q86T82 979 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 TTC16Q8NEE8 873 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 TTC9Q92623 222 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 FGF11Q92914 225 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 MED8Q96G25 268 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 ZNF419Q96HQ0 510 aaPredicted RBP11.74□□□□□ -0.53
SNF8-207ENST00000509995 CCDC94Q9BW85 323 aaPredicted RBP11.74□□□□□ -0.53
SNF8-207ENST00000509995 ZDHHC4Q9NPG8 344 aa11.74□□□□□ -0.53
SNF8-207ENST00000509995 KLF18A0A0U1RQI7 1052 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 A0A1B0GTW7 788 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 SLC27A2O14975 620 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 PRPF3O43395 683 aaKnown RBP11.73□□□□□ -0.53
SNF8-207ENST00000509995 SLITRK3O94933 977 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 LYPLA2O95372 231 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 MATKP42679 507 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 KIR2DL1P43626 348 aaPredicted RBP11.73□□□□□ -0.53
SNF8-207ENST00000509995 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 RTP5Q14D33 572 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 WDR45BQ5MNZ6 344 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 APBB1IPQ7Z5R6 666 aaPredicted RBP11.73□□□□□ -0.53
SNF8-207ENST00000509995 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
SNF8-207ENST00000509995 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 YTHDC1Q96MU7 727 aaKnown RBP11.73□□□□□ -0.53
SNF8-207ENST00000509995 NRSN2Q9GZP1 204 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 CNTN3Q9P232 1028 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 CYP8B1Q9UNU6 501 aa11.73□□□□□ -0.53
SNF8-207ENST00000509995 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNF8-207ENST00000509995 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
SNF8-207ENST00000509995 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 ENO4A6NNW6 628 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 ZNF217O75362 1048 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 GSPT1P15170 499 aaKnown RBP11.72□□□□□ -0.53
SNF8-207ENST00000509995 MAOBP27338 520 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 HSPA4P34932 840 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 TMPRSS3P57727 454 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 OSTNP61366 133 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 NUCB1Q02818 461 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 HLA-BQ31612 363 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 EMC10Q5UCC4 262 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 OVOS1Q6IE37 1185 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 IL27RAQ6UWB1 636 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 ZCCHC9Q8N567 271 aaKnown RBP11.72□□□□□ -0.53
SNF8-207ENST00000509995 MCPH1Q8NEM0 835 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 GIPC2Q8TF65 315 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 HAS1Q92839 578 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 FOXJ1Q92949 421 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 TCEANC2Q96MN5 208 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 ACAP3Q96P50 834 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 LINC00597Q9H2U6 94 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
SNF8-207ENST00000509995 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.53
SNF8-207ENST00000509995 TADA3O75528 432 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 KAT7O95251 611 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 KRT10P13645 584 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 JUPP14923 745 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 HMGA1P17096 107 aaKnown RBP11.71□□□□□ -0.53
SNF8-207ENST00000509995 AARSP49588 968 aaKnown RBP eCLIP11.71□□□□□ -0.53
SNF8-207ENST00000509995 NLRP5P59047 1200 aa11.71□□□□□ -0.53
SNF8-207ENST00000509995 BNC1Q01954 994 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms