RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CETN3O15182 167 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CYP27B1O15528 508 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 AHCYL1O43865 530 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 MGEA5O60502 916 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CTNND1O60716 968 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 DGKIO75912 1065 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 NEBLO76041 1014 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CPP00450 1065 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 MCM5P33992 734 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 SOX6P35712 828 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 HNF4AP41235 474 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 GRK6P43250 576 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 ATP5OP48047 213 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 SULT1E1P49888 294 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 KPNA1P52294 538 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 PMS1P54277 932 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CCNA1P78396 465 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 PABPC4Q13310 644 aaKnown RBP eCLIP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 GALEQ14376 348 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 RRP1BQ14684 758 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 MROH9Q5TGP6 573 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 TDRD10Q5VZ19 366 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 PLEKHM3Q6ZWE6 761 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 B4GALNT4Q76KP1 1039 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 GALNTL5Q7Z4T8 443 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 NECAB2Q7Z6G3 386 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 VSIG1Q86XK7 387 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC83Q8IWF9 413 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 TRMT2AQ8IZ69 625 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 LRRC47Q8N1G4 583 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 SYNPOQ8N3V7 929 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CAMKK1Q8N5S9 505 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 SPATA5Q8NB90 893 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 ARRDC4Q8NCT1 418 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 BBOF1Q8ND07 529 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 OR6C4Q8NGE1 309 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 NSUN6Q8TEA1 469 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 DENND1AQ8TEH3 1009 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 TRPC4APQ8TEL6 797 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 RUFY2Q8WXA3 655 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 PIBF1Q8WXW3 757 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 HAS1Q92839 578 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 SDCCAG3Q96C92 435 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 MTMR8Q96EF0 704 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 MAML3Q96JK9 1138 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 CHCHD6Q9BRQ6 235 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 THUMPD2Q9BTF0 503 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 LRRC3Q9BY71 257 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 B3GNT4Q9C0J1 378 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 GBP3Q9H0R5 595 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 STMN4Q9H169 189 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 GLT8D2Q9H1C3 349 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 TRPV6Q9H1D0 765 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 C12orf65Q9H3J6 166 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 DDX18Q9NVP1 670 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 INTS10Q9NVR2 710 aaKnown RBP4.88□□□□□ -1.63
NIPBL-206ENST00000509429 ENO4A6NNW6 628 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 UBXN8O00124 270 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 SGK1O00141 431 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PDLIM1O00151 329 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 EYA2O00167 538 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 NVLO15381 856 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 BRINP1O60477 761 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PDE8AO60658 829 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 USO1O60763 962 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 RTN3O95197 1032 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 HSPA4LO95757 839 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 DDX58O95786 925 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 NPPAP01160 153 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PYGLP06737 847 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ALAS1P13196 640 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 AKR1B1P15121 316 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ZNF3P17036 446 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 TMEM11P17152 192 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ATP5JP18859 108 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 MSNP26038 577 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 HAAOP46952 286 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 NLRP5P59047 1200 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 B2MP61769 119 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 IL1RL1Q01638 556 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ACY1Q03154 408 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 AP1B1Q10567 949 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 GPS2Q13227 327 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 SGCGQ13326 291 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 TRIM14Q14142 442 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ATP2B3Q16720 1220 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 TRIM71Q2Q1W2 868 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 MAJINQ3KP22 176 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 MTERF2Q49AM1 385 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PRR16Q569H4 304 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC183Q5T5S1 534 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 TLDC1Q6P9B6 456 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PPP1R21Q6ZMI0 780 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC81Q6ZN84 652 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 NUP54Q7Z3B4 507 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 CEP57Q86XR8 500 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 FAM186BQ8IYM0 893 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 LSMEM2Q8N112 164 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 UBR7Q8N806 425 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms