RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 LPIN3Q9BQK8 851 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 PDCL3Q9H2J4 239 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 ABCB6Q9NP58 842 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 MAN1C1Q9NR34 630 aa15.76■□□□□ 0.11
RNF4-213ENST00000509388 LUC7L2Q9Y383 392 aaKnown RBP15.76■□□□□ 0.11
RNF4-213ENST00000509388 RNF225M0QZC1 329 aaPredicted RBP15.75■□□□□ 0.11
RNF4-213ENST00000509388 GFPT2O94808 682 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 ADCY5O95622 1261 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 C8AP07357 584 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 PNMA6AP0CW24 399 aaPredicted RBP15.75■□□□□ 0.11
RNF4-213ENST00000509388 CCDC130P13994 396 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 BDNFP23560 247 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 ADORA2BP29275 332 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 GTF2F1P35269 517 aaKnown RBP eCLIP15.75■□□□□ 0.119e-9■■■■■ 35.7
RNF4-213ENST00000509388 GRIK1P39086 918 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 ALDH1A3P47895 512 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 ARID5AQ03989 594 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 STILQ15468 1287 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
RNF4-213ENST00000509388 CFAP221Q4G0U5 840 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 PPM1LQ5SGD2 360 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 SCN4BQ8IWT1 228 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 TCEAL8Q8IYN2 117 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 FAM71AQ8IYT1 594 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 SLC7A14Q8TBB6 771 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 HNRNPABQ99729 332 aaKnown RBP15.75■□□□□ 0.11
RNF4-213ENST00000509388 B3GNT5Q9BYG0 378 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 NUCKS1Q9H1E3 243 aaKnown RBP15.75■□□□□ 0.11
RNF4-213ENST00000509388 DZANK1Q9NVP4 752 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 CLDND1Q9NY35 253 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 HSFX1Q9UBD0 423 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 HESX1Q9UBX0 185 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 FBXW11Q9UKB1 542 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 MYO6Q9UM54 1294 aa15.75■□□□□ 0.11
RNF4-213ENST00000509388 A0A1W2PQJ5 194 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 THAP12O43422 761 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 LRG1P02750 347 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 FAM200BP0CF97 657 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 CYP2F1P24903 491 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 ANXA13P27216 316 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 PDE6CP51160 858 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 ZNF132P52740 706 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 JAM2P57087 298 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 RPL10AP62906 217 aaKnown RBP15.74■□□□□ 0.11
RNF4-213ENST00000509388 PLD1Q13393 1074 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 ADAM15Q13444 863 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 GSE1Q14687 1217 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 PPP1R26Q5T8A7 1209 aaPredicted RBP15.74■□□□□ 0.11
RNF4-213ENST00000509388 SFMBT2Q5VUG0 894 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 ARHGAP17Q68EM7 881 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 RTL10Q7L3V2 364 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 FUKQ8N0W3 1084 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 ANP32BQ92688 251 aaKnown RBP15.74■□□□□ 0.11
RNF4-213ENST00000509388 SMARCD1Q96GM5 515 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 ZNF518BQ9C0D4 1074 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 GPR88Q9GZN0 384 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 CAPN11Q9UMQ6 739 aa15.74■□□□□ 0.11
RNF4-213ENST00000509388 COL4A4P53420 1690 aaPredicted RBP15.73■□□□□ 0.11
RNF4-213ENST00000509388 LRRC53A6NM62 1247 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 CLDN5O00501 218 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 TRIM66O15016 1216 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 ZMYND10O75800 440 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 AP1G2O75843 785 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 SEC24AO95486 1093 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 HAPLN1P10915 354 aaPredicted RBP15.73■□□□□ 0.11
RNF4-213ENST00000509388 FERP16591 822 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 BRD2P25440 801 aaKnown RBP15.73■□□□□ 0.11
RNF4-213ENST00000509388 CASP14P31944 242 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 CLCN1P35523 988 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 KRT9P35527 623 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 MRE11P49959 708 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 EPHB3P54753 998 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 ZBED6P86452 979 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 VEPH1Q14D04 833 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 CNGA2Q16280 664 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 TAF12Q16514 161 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 ASIC2Q16515 512 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 GOLGA7BQ2TAP0 167 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 FAM35AQ86V20 835 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 ELMOD1Q8N336 334 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 ZNF606Q8WXB4 792 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 KRT82Q9NSB4 513 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 TSPAN16Q9UKR8 245 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 INSL5Q9Y5Q6 135 aa15.73■□□□□ 0.11
RNF4-213ENST00000509388 LAMA2P24043 3122 aaKnown RBP15.73■□□□□ 0.11
RNF4-213ENST00000509388 VWA8A3KMH1 1905 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 CHD9Q3L8U1 2897 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 LINC01565O15544 149 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 XYLBO75191 536 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 CALCAP01258 141 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 GYPCP04921 128 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 CYP11B1P15538 503 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 MAGEA11P43364 429 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 RBM10P98175 930 aaKnown RBP15.72■□□□□ 0.11
RNF4-213ENST00000509388 TWF1Q12792 350 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 TMEM184AQ6ZMB5 413 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms