RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 BRINP1O60477 761 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 BPIP17213 487 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 WASP42768 502 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 PDE1AP54750 535 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 ID2Q02363 134 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 NFE2L2Q16236 605 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 PDXDC1Q6P996 788 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 KIRREL2Q6UWL6 708 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 SERPINA13PQ6UXR4 307 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 RHOT1Q8IXI2 618 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 ZNF548Q8NEK5 533 aaPredicted RBP2.91□□□□□ -1.94
XRCC4-204ENST00000509268 ABHD11Q8NFV4 315 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 B4GALNT2Q8NHY0 566 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 TGFBRAP1Q8WUH2 860 aa2.91□□□□□ -1.94
XRCC4-204ENST00000509268 THAP7Q9BT49 309 aaPredicted RBP2.91□□□□□ -1.94
XRCC4-204ENST00000509268 TARS2Q9BW92 718 aaKnown RBP2.91□□□□□ -1.94
XRCC4-204ENST00000509268 TMEM232C9JQI7 657 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 ACOT8O14734 319 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 ZEB2O60315 1214 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 GPSM2P81274 684 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 ZNF91Q05481 1191 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 VPS53Q5VIR6 699 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 ICE2Q659A1 982 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 IFI44Q8TCB0 444 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 ADAMTS18Q8TE60 1221 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 TMX3Q96JJ7 454 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 EFHD1Q9BUP0 239 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 CNPPD1Q9BV87 410 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 SIK2Q9H0K1 926 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 TDP1Q9NUW8 608 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 CD2APQ9Y5K6 639 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 RAD54BQ9Y620 910 aa2.9□□□□□ -1.95
XRCC4-204ENST00000509268 EXOC3O60645 756 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 PDHA1P08559 390 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 DLDP09622 509 aaKnown RBP2.89□□□□□ -1.95
XRCC4-204ENST00000509268 CDC42EP1Q00587 391 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 ANO7Q6IWH7 933 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 ANKRD13BQ86YJ7 626 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.89□□□□□ -1.95
XRCC4-204ENST00000509268 NIM1KQ8IY84 436 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 UBXN4Q92575 508 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 FYTTD1Q96QD9 318 aaKnown RBP2.89□□□□□ -1.95
XRCC4-204ENST00000509268 TFCP2L1Q9NZI6 479 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 CADPSQ9ULU8 1353 aa2.89□□□□□ -1.95
XRCC4-204ENST00000509268 BTBD19C9JJ37 291 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 TNFRSF13BO14836 293 aaPredicted RBP2.88□□□□□ -1.95
XRCC4-204ENST00000509268 CGAP01215 116 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 NGFRP08138 427 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 SRSF2Q01130 221 aaKnown RBP2.88□□□□□ -1.95
XRCC4-204ENST00000509268 TCF15Q12870 199 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 TARDBPQ13148 414 aaKnown RBP eCLIP2.88□□□□□ -1.95
XRCC4-204ENST00000509268 HABP2Q14520 560 aaPredicted RBP2.88□□□□□ -1.95
XRCC4-204ENST00000509268 RAB39AQ14964 217 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 FAM187BQ17R55 369 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 C21orf62-AS1Q17RA5 79 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 C4orf46Q504U0 113 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 NPNTQ6UXI9 565 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 Q6ZWC4 215 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 USP7Q93009 1102 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 ZNF479Q96JC4 524 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 LMLNQ96KR4 655 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 KANSL2Q9H9L4 492 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 RLIMQ9NVW2 624 aa2.88□□□□□ -1.95
XRCC4-204ENST00000509268 TCRBV5S1A1TA0A578 114 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 SGTAO43765 313 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 MTNR1BP49286 362 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 RENBPP51606 427 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 DHCR24Q15392 516 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 INPP5JQ15735 1006 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 ZNF324BQ6AW86 544 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 GIMAP6Q6P9H5 292 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 MMP21Q8N119 569 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 OSR1Q8TAX0 266 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 WFIKKN2Q8TEU8 576 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 OSBPL2Q9H1P3 480 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 IFT22Q9H7X7 185 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 TMEM184CQ9NVA4 438 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 CALCOCO1Q9P1Z2 691 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 LINC01565O15544 149 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 RNF8O76064 485 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 FGF3P11487 239 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 CYP19A1P11511 503 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 CDC25AP30304 524 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 THBS4P35443 961 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 GCLCP48506 637 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 CLCN2P51788 898 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 TPTEP56180 551 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 RPS13P62277 151 aaKnown RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 FAPQ12884 760 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 SF3A1Q15459 793 aaKnown RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 HIST2H2BCQ6DN03 193 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 RNF180Q86T96 592 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 ZNF329Q86UD4 541 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 PMFBP1Q8TBY8 1022 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 DPF2Q92785 391 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 BRD9Q9H8M2 597 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 MRPL44Q9H9J2 332 aaKnown RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 DNAJC28Q9NX36 388 aa2.87□□□□□ -1.95
XRCC4-204ENST00000509268 SIDT1Q9NXL6 827 aaKnown RBP2.87□□□□□ -1.95
XRCC4-204ENST00000509268 CCNL1Q9UK58 526 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms