RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 WDHD1O75717 1129 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 JTBO76095 146 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 CHEK2O96017 543 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 GJB1P08034 283 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 ATF3P18847 181 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 PTMSP20962 102 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 CCKARP32238 428 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 CYP2C19P33261 490 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 NR4A2P43354 598 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 KRT85P78386 507 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 POU5F1BQ06416 359 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 TTF1Q15361 905 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 TBCCQ15814 346 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 NFE2Q16621 373 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 PLAC9Q5JTB6 97 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 RBM20Q5T481 1227 aaKnown RBP2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 VPS53Q5VIR6 699 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 PPP4R3AQ6IN85 833 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 PGM2L1Q6PCE3 622 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 SLC4A10Q6U841 1118 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 FAM90A1Q86YD7 464 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZDHHC17Q8IUH5 632 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 CHPFQ8IZ52 775 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 AOPEPQ8N6M6 819 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 KLHDC4Q8TBB5 520 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 TBC1D5Q92609 795 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 FAM136AQ96C01 138 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 FAXDC2Q96IV6 333 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 TEKT5Q96M29 485 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 MPHOSPH6Q99547 160 aaKnown RBP2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 CNPPD1Q9BV87 410 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 EBF3Q9H4W6 596 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 BRD9Q9H8M2 597 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 ARHGEF3Q9NR81 526 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 MKS1Q9NXB0 559 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 SLC5A4Q9NY91 659 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 ANAPC4Q9UJX5 808 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 SPEF1Q9Y4P9 236 aa2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 CFAP20Q9Y6A4 193 aaKnown RBP2.96□□□□□ -1.94
DEPDC1B-204ENST00000509006 IGKV2D-30A0A075B6S6 120 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 KLHL33A6NCF5 533 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 H0YIZ8 118 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 IFRD1O00458 451 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 PPP6CO00743 305 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 SOAT2O75908 522 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 NXPH3O95157 252 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 LDHAP00338 332 aaKnown RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 MT-CO1P00395 513 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 TUBB4AP04350 444 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 PDHA1P08559 390 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 PRDX5P30044 214 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 GUCY2FP51841 1108 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZNF134P52741 427 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZNF135P52742 658 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 PSMC1P62191 440 aaKnown RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 ITKQ08881 620 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 BOP1Q14137 746 aaKnown RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 KIF22Q14807 665 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 KHDC1Q4VXA5 237 aaKnown RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 MIDNQ504T8 468 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 AARS2Q5JTZ9 985 aaKnown RBP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZNF618Q5T7W0 954 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 PRAMEF17Q5VTA0 474 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 ANKRD16Q6P6B7 361 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 MAVSQ7Z434 540 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 DTX2Q86UW9 622 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 DDX42Q86XP3 938 aaKnown RBP eCLIP2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 MYO1HQ8N1T3 1032 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 SMRP1Q8NCR6 262 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 ATRIPQ8WXE1 791 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 HMCESQ96FZ2 354 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 CAMKK2Q96RR4 588 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 VPS16Q9H269 839 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 MAN1C1Q9NR34 630 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 DLL3Q9NYJ7 618 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 CFAP97Q9P2B7 532 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 TTC3P53804 2025 aa2.95□□□□□ -1.94
DEPDC1B-204ENST00000509006 PRRT4C9JH25 899 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 PPM1DO15297 605 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 KIF20AO95235 890 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 FAM163BP0C2L3 166 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 CT47B1P0C2W7 299 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 NBPF7P0C2Y1 421 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 RARBP10826 455 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 NDUFB7P17568 137 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 CHRM3P20309 590 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 ITGALP20701 1170 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 PAX3P23760 479 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 CD6P30203 668 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 MMP13P45452 471 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 PIK3CGP48736 1102 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 LINC00205P59089 165 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 KIF23Q02241 960 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 DHX8Q14562 1220 aaKnown RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 ACAP2Q15057 778 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 RABEP1Q15276 862 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 GFOD2Q3B7J2 385 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 MAP9Q49MG5 647 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 TEDDM1Q5T9Z0 273 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 WDR78Q5VTH9 848 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms