RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 TRAPPC11Q7Z392 1133 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 RALGPS2Q86X27 583 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 CMTM8Q8IZV2 173 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 OR5B17Q8NGF7 314 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 LEO1Q8WVC0 666 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 FAM126AQ9BYI3 521 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 SMG9Q9H0W8 520 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 CHRDQ9H2X0 955 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 SNX25Q9H3E2 840 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 IL21Q9HBE4 155 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 SLC39A2Q9NP94 309 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 AGPAT3Q9NRZ7 376 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 GTSE1Q9NYZ3 720 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 CGNQ9P2M7 1197 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 NCDNQ9UBB6 729 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 MAGEC2Q9UBF1 373 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 SIX4Q9UIU6 781 aa10.81□□□□□ -0.68
UBE2D3-227ENST00000508818 COL4A3Q01955 1670 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 MYBPHLA2RUH7 354 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 SOBPA7XYQ1 873 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 SPECC1L-ADORA2AF8WAN1 911 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 GABRDO14764 452 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 EXOC3O60645 756 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 PRAMEF12O95522 483 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 F11P03951 625 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 HMGA1P17096 107 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 ANXA13P27216 316 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CASP1P29466 404 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 HOXD13P35453 343 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 GNL1P36915 607 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 GRIK1P39086 918 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CXCL12P48061 93 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 SOX9P48436 509 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 TNNC1P63316 161 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CYP27A1Q02318 531 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 DNM1Q05193 864 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CYP24A1Q07973 514 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 FZD5Q13467 585 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CUL4BQ13620 913 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 PSMD6Q15008 389 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 TXNDC8Q6A555 127 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 MON1AQ86VX9 555 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 OSTM1Q86WC4 334 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 KIAA2013Q8IYS2 634 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 FSIP1Q8NA03 581 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 OR6B3Q8NGW1 331 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 GOLGA5Q8TBA6 731 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 SCFD1Q8WVM8 642 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 EXOC4Q96A65 974 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 FUBP3Q96I24 572 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 LRRC3BQ96PB8 259 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 SYT15Q9BQS2 421 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 MKNK1Q9BUB5 465 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 TRPC7Q9HCX4 862 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 TDP1Q9NUW8 608 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 EXOC1Q9NV70 894 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 EHD2Q9NZN4 543 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 RCOR1Q9UKL0 485 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 CDH9Q9ULB4 789 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 RAB23Q9ULC3 237 aa10.8□□□□□ -0.68
UBE2D3-227ENST00000508818 SHISA7A6NL88 538 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 ARNTLO00327 626 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 TGFB1I1O43294 461 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 NOL4O94818 638 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 CKMP06732 381 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 USP17L7P0C7H9 530 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 SLFN14P0C7P3 912 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 CHRNB1P11230 501 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 WARSP23381 471 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 CTHP32929 405 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 MAGEA11P43364 429 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 ID4P47928 161 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 PSMC1P62191 440 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 PSMD2Q13200 908 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 BIRC3Q13489 604 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 PON2Q15165 354 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 KNOP1Q1ED39 458 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 WDR72Q3MJ13 1102 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 SCARA3Q6AZY7 606 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 SPEM1Q8N4L4 309 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 CXorf38Q8TB03 319 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 PAGE5Q96GU1 130 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 CGRRF1Q99675 332 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 KIF9Q9HAQ2 790 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 PRMT8Q9NR22 394 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 USP25Q9UHP3 1055 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 SERTAD1Q9UHV2 236 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 SPTBN4Q9H254 2564 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 GVINP1Q7Z2Y8 2422 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 NCANO14594 1321 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 PTPRJQ12913 1337 aa10.79□□□□□ -0.68
UBE2D3-227ENST00000508818 TRAV19A0A0A6YYK7 116 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 HCRTO43612 131 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 ATP2C2O75185 946 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 CST3P01034 146 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 FAM163BP0C2L3 166 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms