RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ASB2Q96Q27 587 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 GAD1Q99259 594 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 BHMT2Q9H2M3 363 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 FAM105AQ9NUU6 356 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TRMT1Q9NXH9 659 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 AIPL1Q9NZN9 384 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SLC27A5Q9Y2P5 690 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MAD1L1Q9Y6D9 718 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 DOCK5Q9H7D0 1870 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ATRNL1Q5VV63 1379 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 UMODL1Q5DID0 1318 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KANSL1LA0AUZ9 987 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM43BA6NCK2 446 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ARL5CA6NH57 179 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SOWAHDA6NJG2 315 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TMCC1O94876 653 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DNTTP04053 509 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 FECHP22830 423 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PAX3P23760 479 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 BMPR1AP36894 532 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DUOXA2Q1HG44 320 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TUSC1Q2TAM9 212 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TCEAL5Q5H9L2 206 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TMEM164Q5U3C3 297 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 OVOS1Q6IE37 1185 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CYP26C1Q6V0L0 522 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RAPH1Q70E73 1250 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GRASPQ7Z6J2 395 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 AOPEPQ8N6M6 819 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 VPS37AQ8NEZ2 397 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DBF4BQ8NFT6 615 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM43Q96BQ3 446 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TBC1D32Q96NH3 1257 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NR1H4Q96RI1 486 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TSSK1BQ9BXA7 367 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM45Q9H8W5 580 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DDX43Q9NXZ2 648 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 EXTL2Q9UBQ6 330 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 UBQLN1Q9UMX0 589 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SNX9Q9Y5X1 595 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 LOXHD1Q8IVV2 1947 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NEDD8-MDP1E9PL57 170 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 H7C0C1 242 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KDM1AO60341 852 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PFKFB2O60825 505 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ZSCAN22P10073 491 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ATP5OP48047 213 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ELOAQ14241 798 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GRIN2CQ14957 1233 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KARSQ15046 597 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 JADE1Q6IE81 842 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 C8orf74Q6P047 294 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RASGRP2Q7LDG7 609 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CYP2U1Q7Z449 544 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CDKL2Q92772 493 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 C1QTNF7Q9BXJ2 289 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 OSBPL2Q9H1P3 480 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 IL17RBQ9NRM6 502 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 KRT82Q9NSB4 513 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RAB20Q9NX57 234 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 C6orf203Q9P0P8 240 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PCDH10Q9P2E7 1040 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TIMM13Q9Y5L4 95 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TCRBV21S2A2A0A5A6 115 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TBC1D4O60343 1298 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 JAK2O60674 1132 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ADCY5O95622 1261 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CAPNS1P04632 268 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GABRR2P28476 465 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 NPY2RP49146 381 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ACOT2P49753 483 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 AP3M2P53677 418 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CAMK2BQ13554 666 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CDO1Q16878 200 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SPATS2Q86XZ4 545 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RNF135Q8IUD6 432 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CCHCR1Q8TD31 782 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 HSPH1Q92598 858 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 TMX3Q96JJ7 454 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 FAM81BQ96LP2 452 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RIT2Q99578 217 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SELENOSQ9BQE4 189 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PDCD2LQ9BRP1 358 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ANKEF1Q9NU02 776 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SUN2Q9UH99 717 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 STXBP5LQ9Y2K9 1186 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MAFBQ9Y5Q3 323 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 SQORQ9Y6N5 450 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MYH10P35580 1976 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF638Q14966 1978 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ZSWIM8A7E2V4 1837 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 A0A087WWV3 80 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 CLASP2O75122 1294 aaKnown RBP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 MYL1P05976 194 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 RB1P06400 928 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 APOA4P06727 396 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 PLCG1P19174 1290 aa3.1□□□□□ -1.91
NEDD4-208ENST00000508342 DDX6P26196 483 aaKnown RBP eCLIP3.1□□□□□ -1.91
NEDD4-208ENST00000508342 ATP1A2P50993 1020 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms