RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TNFSF13BQ9Y275 285 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 C15orf41Q9Y2V0 281 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 CCL27Q9Y4X3 112 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 EHBP1L1Q8N3D4 1523 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 PBRM1Q86U86 1689 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 CCDC151A5D8V7 595 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 PPM1BO75688 479 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 DLGAP3O95886 979 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 TPP2P29144 1249 aaPredicted RBP7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 CCR1P32246 355 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 TXLNAP40222 546 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 GRM5P41594 1212 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 MTNR1BP49286 362 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 BLVRAP53004 296 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 PTPN5P54829 565 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 RAB1AP62820 205 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 GALNT2Q10471 571 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 DPYSQ14117 519 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 IQCB1Q15051 598 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 SPRED3Q2MJR0 410 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 UBE3BQ7Z3V4 1068 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 SESTD1Q86VW0 696 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 MRPL43Q8N983 215 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 ARRDC4Q8NCT1 418 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 KHSRPQ92945 711 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 KTI12Q96EK9 354 aaPredicted RBP7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 PKP4Q99569 1192 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 PRRX2Q99811 253 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 FTOQ9C0B1 505 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 USP44Q9H0E7 712 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 DPH5Q9H2P9 285 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 CWC15Q9P013 229 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 BAG5Q9UL15 447 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 NAALAD2Q9Y3Q0 740 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 NR2E3Q9Y5X4 410 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 POMT1Q9Y6A1 747 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 PTPRKQ15262 1439 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 MYOM3Q5VTT5 1437 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 NCOA2Q15596 1464 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 CCDC18Q5T9S5 1454 aa7.95□□□□□ -1.14
PDGFRA-206ENST00000508170 A0A1W2PRV1 198 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 GOLGA8CPA6NN73 597 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 E2F3O00716 465 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 IFIT3O14879 490 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 GGPS1O95749 300 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 INHBAP08476 426 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 HPGDP15428 266 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 TM4SF1P30408 202 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 KCNC1P48547 511 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 MECP2P51608 486 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 ARSDP51689 593 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CDR1P51861 262 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 VCPP55072 806 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 DLG4P78352 724 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 PLD1Q13393 1074 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 DPYSL2Q16555 572 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 HFEQ30201 348 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 TMEM177Q53S58 311 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CNTNAP3BQ96NU0 1288 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 TWNKQ96RR1 684 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CDK5RAP1Q96SZ6 601 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CNTNAP3Q9BZ76 1288 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 VPS16Q9H269 839 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 ZNF287Q9HBT7 754 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 GDAP2Q9NXN4 497 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 IGSF9Q9P2J2 1179 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 REV1Q9UBZ9 1251 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CYP8B1Q9UNU6 501 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 NAALADL1Q9UQQ1 740 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 UACAQ9BZF9 1416 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 SUPT6HQ7KZ85 1726 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 EVC2Q86UK5 1308 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 RECQL4O94761 1208 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 ANXA6P08133 673 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 FGFR2P21802 821 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 AOAHP28039 575 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 GCH1P30793 250 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 ARF5P84085 180 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 DMPKQ09013 629 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 CHIT1Q13231 466 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 PDIA5Q14554 519 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 TBC1D25Q3MII6 688 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 H1FNTQ75WM6 255 aaPredicted RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 OR6J1Q8NGC5 347 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 GANCQ8TET4 914 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 THAP4Q8WY91 577 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 SPACA9Q96E40 222 aaPredicted RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 EDC3Q96F86 508 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 ZKSCAN3Q9BRR0 538 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 SELENONQ9NZV5 590 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 OGDHLQ9ULD0 1010 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 TBX20Q9UMR3 447 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 SMG5Q9UPR3 1016 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 NOC2LQ9Y3T9 749 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 FHOD1Q9Y613 1164 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 PTPN23Q9H3S7 1636 aa7.94□□□□□ -1.14
PDGFRA-206ENST00000508170 A8MV72 311 aaPredicted RBP7.93□□□□□ -1.14
PDGFRA-206ENST00000508170 H0YIN7 160 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms