RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CCDC150Q8NCX0 1101 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 LRRC46Q96FV0 321 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 PTDSS2Q9BVG9 487 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 ALOXE3Q9BYJ1 711 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 DHX36Q9H2U1 1008 aaKnown RBP4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZNF703Q9H7S9 590 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 GALNT9Q9HCQ5 603 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 CEP72Q9P209 647 aa4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P28-201ENST00000507778 A0A087WV62 115 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 MARCH11A6NNE9 402 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 H7C4K7 107 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 TRIAP1O43715 76 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZFPL1O95159 310 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 A1BGP04217 495 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 TPH1P17752 444 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 LAG3P18627 525 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 MAGEA10P43363 369 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 NPTX2P47972 431 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 NDUFV1P49821 464 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 CPT1AP50416 773 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 DGKEP52429 567 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 TRIM14Q14142 442 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 DHX8Q14562 1220 aaKnown RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 NPY5RQ15761 445 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 BEAN1Q3B7T3 259 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 CD300EQ496F6 205 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 NRN1LQ496H8 165 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 SP5Q6BEB4 398 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 ERAP2Q6P179 960 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 PGBD2Q6P3X8 592 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 KRT28Q7Z3Y7 464 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 COLGALT2Q8IYK4 626 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 ADGRG5Q8IZF4 528 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 FAM9AQ8IZU1 332 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZNF276Q8N554 614 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 CPEB3Q8NE35 698 aaKnown RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 SNX19Q92543 992 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 TMEM125Q96AQ2 219 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 NACC2Q96BF6 587 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 NELL2Q99435 816 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 TTLL2Q9BWV7 592 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 PPCSQ9HAB8 311 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 TMEM74BQ9NUR3 256 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 CAPN11Q9UMQ6 739 aa4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 MAGED2Q9UNF1 606 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P28-201ENST00000507778 A0A0B4J269 797 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 hCG_1984214I3L0E3 225 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 FFAR2O15552 330 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 IDEP14735 1019 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 DDX6P26196 483 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 BMPR1AP36894 532 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 PTDSS1P48651 473 aaKnown RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 SLC25A3Q00325 362 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 ICA1Q05084 483 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 TUBB3Q13509 450 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 E2F2Q14209 437 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 PDCD2Q16342 344 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 GEN1Q17RS7 908 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 RBM20Q5T481 1227 aaKnown RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 CACHD1Q5VU97 1274 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 PLAG1Q6DJT9 500 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 FCRL6Q6DN72 434 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 SFRP4Q6FHJ7 346 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 FBXO38Q6PIJ6 1188 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZNF527Q8NB42 609 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 BPIFB1Q8TDL5 484 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 SLC25A43Q8WUT9 341 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 PPP2R3CQ969Q6 453 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 MUL1Q969V5 352 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 SNX27Q96L92 541 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 GDF15Q99988 308 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 STK33Q9BYT3 514 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 DKK4Q9UBT3 224 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 SLC39A10Q9ULF5 831 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 MRPS17Q9Y2R5 130 aaKnown RBP4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 CDY1Q9Y6F8 540 aa4.85□□□□□ -1.63
HMGB1P28-201ENST00000507778 TRGV11A0A075B6L2 103 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 AQP7P3A6NL99 342 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 CDKL5O76039 1030 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 RASAL1O95294 804 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 NDST3O95803 873 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 FOSP01100 380 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZNF20P17024 532 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 KCNA3P22001 575 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 GATA3P23771 443 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 CD6P30203 668 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 PPIFP30405 207 aaKnown RBP4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 VAV2P52735 878 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 COPAP53621 1224 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 ITGA8P53708 1063 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 PRKAG1P54619 331 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 MYO1EQ12965 1108 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 ELF2Q15723 593 aa4.84□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZNF750Q32MQ0 723 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms