RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PCDHB18PQ96TA0 734 aa15.06■□□□□ 0
RNF4-208ENST00000507247 BAG1Q99933 345 aaPredicted RBP15.06■□□□□ 0
RNF4-208ENST00000507247 AGPAT1Q99943 283 aa15.06■□□□□ 0
RNF4-208ENST00000507247 OXCT2Q9BYC2 517 aaPredicted RBP15.06■□□□□ 0
RNF4-208ENST00000507247 RHOBTB2Q9BYZ6 727 aa15.06■□□□□ 0
RNF4-208ENST00000507247 KCNF1Q9H3M0 494 aa15.06■□□□□ 0
RNF4-208ENST00000507247 RXFP1Q9HBX9 757 aa15.06■□□□□ 0
RNF4-208ENST00000507247 TSPAN16Q9UKR8 245 aa15.06■□□□□ 0
RNF4-208ENST00000507247 KIAA1257Q9ULG3 409 aa15.06■□□□□ 0
RNF4-208ENST00000507247 BZW2Q9Y6E2 419 aaKnown RBP15.06■□□□□ 0
RNF4-208ENST00000507247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.05■□□□□ -0
RNF4-208ENST00000507247 SSU72P8A0A1W2PR75 194 aa15.05■□□□□ -0
RNF4-208ENST00000507247 WDR27A2RRH5 827 aa15.05■□□□□ -0
RNF4-208ENST00000507247 C2orf71A6NGG8 1288 aa15.05■□□□□ -0
RNF4-208ENST00000507247 SOWAHDA6NJG2 315 aa15.05■□□□□ -0
RNF4-208ENST00000507247 HIDE1A8MVS5 230 aa15.05■□□□□ -0
RNF4-208ENST00000507247 RFXAPO00287 272 aa15.05■□□□□ -0
RNF4-208ENST00000507247 DDX3XO00571 662 aaKnown RBP eCLIP15.05■□□□□ -02e-8■■■□□ 17.9
RNF4-208ENST00000507247 TEX28O15482 410 aa15.05■□□□□ -0
RNF4-208ENST00000507247 CPB1P15086 417 aa15.05■□□□□ -0
RNF4-208ENST00000507247 CA8P35219 290 aa15.05■□□□□ -0
RNF4-208ENST00000507247 GPR17Q13304 367 aa15.05■□□□□ -0
RNF4-208ENST00000507247 SMC1AQ14683 1233 aaKnown RBP15.05■□□□□ -0
RNF4-208ENST00000507247 CNGA2Q16280 664 aa15.05■□□□□ -0
RNF4-208ENST00000507247 GOLGA7BQ2TAP0 167 aa15.05■□□□□ -0
RNF4-208ENST00000507247 ASTE1Q2TB18 679 aaPredicted RBP15.05■□□□□ -0
RNF4-208ENST00000507247 DENND1BQ6P3S1 775 aa15.05■□□□□ -0
RNF4-208ENST00000507247 LCLAT1Q6UWP7 414 aa15.05■□□□□ -0
RNF4-208ENST00000507247 CYP26C1Q6V0L0 522 aa15.05■□□□□ -0
RNF4-208ENST00000507247 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
RNF4-208ENST00000507247 FAM35AQ86V20 835 aa15.05■□□□□ -0
RNF4-208ENST00000507247 TTC30AQ86WT1 665 aa15.05■□□□□ -0
RNF4-208ENST00000507247 ZNF677Q86XU0 584 aa15.05■□□□□ -0
RNF4-208ENST00000507247 ZNF830Q96NB3 372 aaPredicted RBP15.05■□□□□ -0
RNF4-208ENST00000507247 PGLYRP2Q96PD5 576 aa15.05■□□□□ -0
RNF4-208ENST00000507247 HNRNPABQ99729 332 aaKnown RBP15.05■□□□□ -0
RNF4-208ENST00000507247 ZNF518BQ9C0D4 1074 aa15.05■□□□□ -0
RNF4-208ENST00000507247 DNAI2Q9GZS0 605 aa15.05■□□□□ -0
RNF4-208ENST00000507247 NHEJ1Q9H9Q4 299 aaPredicted RBP15.05■□□□□ -0
RNF4-208ENST00000507247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.05■□□□□ -0
RNF4-208ENST00000507247 TMEM30AQ9NV96 361 aa15.05■□□□□ -0
RNF4-208ENST00000507247 FNIP2Q9P278 1114 aa15.05■□□□□ -0
RNF4-208ENST00000507247 PCDHGC3Q9UN70 934 aa15.05■□□□□ -0
RNF4-208ENST00000507247 SSX2IPQ9Y2D8 614 aa15.05■□□□□ -0
RNF4-208ENST00000507247 IRAK3Q9Y616 596 aa15.05■□□□□ -0
RNF4-208ENST00000507247 MTCL1Q9Y4B5 1905 aaKnown RBP15.04■□□□□ -0
RNF4-208ENST00000507247 FAM170AA1A519 330 aa15.04■□□□□ -0
RNF4-208ENST00000507247 MTMR11A4FU01 709 aa15.04■□□□□ -0
RNF4-208ENST00000507247 M0QYV0 167 aa15.04■□□□□ -0
RNF4-208ENST00000507247 MED7O43513 233 aa15.04■□□□□ -0
RNF4-208ENST00000507247 LPXNO60711 386 aa15.04■□□□□ -0
RNF4-208ENST00000507247 CNPP09543 421 aaKnown RBP15.04■□□□□ -0
RNF4-208ENST00000507247 TNFAIP3P21580 790 aa15.04■□□□□ -0
RNF4-208ENST00000507247 CYP27A1Q02318 531 aa15.04■□□□□ -0
RNF4-208ENST00000507247 MTF1Q14872 753 aa15.04■□□□□ -0
RNF4-208ENST00000507247 STILQ15468 1287 aa15.04■□□□□ -0
RNF4-208ENST00000507247 MAPRE1Q15691 268 aaKnown RBP15.04■□□□□ -0
RNF4-208ENST00000507247 PKDCCQ504Y2 493 aa15.04■□□□□ -0
RNF4-208ENST00000507247 RAD9BQ6WBX8 426 aa15.04■□□□□ -0
RNF4-208ENST00000507247 TMTC1Q8IUR5 882 aa15.04■□□□□ -0
RNF4-208ENST00000507247 PASD1Q8IV76 773 aa15.04■□□□□ -0
RNF4-208ENST00000507247 TTC9BQ8N6N2 239 aa15.04■□□□□ -0
RNF4-208ENST00000507247 MRPL43Q8N983 215 aaKnown RBP15.04■□□□□ -0
RNF4-208ENST00000507247 SLC30A5Q8TAD4 765 aa15.04■□□□□ -0
RNF4-208ENST00000507247 UBA3Q8TBC4 463 aa15.04■□□□□ -0
RNF4-208ENST00000507247 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
RNF4-208ENST00000507247 MED10Q9BTT4 135 aa15.04■□□□□ -0
RNF4-208ENST00000507247 ZNF576Q9H609 170 aa15.04■□□□□ -0
RNF4-208ENST00000507247 NGRNQ9NPE2 291 aaKnown RBP15.04■□□□□ -0
RNF4-208ENST00000507247 MTMR10Q9NXD2 777 aa15.04■□□□□ -0
RNF4-208ENST00000507247 A0A087X0T9 212 aa15.03■□□□□ -0
RNF4-208ENST00000507247 ABLIM3O94929 683 aa15.03■□□□□ -0
RNF4-208ENST00000507247 CYP1A1P04798 512 aaPredicted RBP15.03■□□□□ -0
RNF4-208ENST00000507247 FAM228BP0C875 321 aa15.03■□□□□ -0
RNF4-208ENST00000507247 BDNFP23560 247 aa15.03■□□□□ -0
RNF4-208ENST00000507247 NDUFV1P49821 464 aa15.03■□□□□ -0
RNF4-208ENST00000507247 KIF11P52732 1056 aa15.03■□□□□ -0
RNF4-208ENST00000507247 CACNA2D1P54289 1103 aa15.03■□□□□ -0
RNF4-208ENST00000507247 CREMQ03060 361 aa15.03■□□□□ -0
RNF4-208ENST00000507247 RAB33AQ14088 237 aa15.03■□□□□ -0
RNF4-208ENST00000507247 BMS1Q14692 1282 aaKnown RBP15.03■□□□□ -0
RNF4-208ENST00000507247 NFE2Q16621 373 aaPredicted RBP15.03■□□□□ -0
RNF4-208ENST00000507247 GPR153Q6NV75 609 aa15.03■□□□□ -0
RNF4-208ENST00000507247 C4orf50Q6ZRC1 276 aa15.03■□□□□ -0
RNF4-208ENST00000507247 SPATA2LQ8IUW3 424 aaPredicted RBP15.03■□□□□ -0
RNF4-208ENST00000507247 WDTC1Q8N5D0 677 aa15.03■□□□□ -0
RNF4-208ENST00000507247 ATAD1Q8NBU5 361 aa15.03■□□□□ -0
RNF4-208ENST00000507247 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
RNF4-208ENST00000507247 MICAL1Q8TDZ2 1067 aa15.03■□□□□ -0
RNF4-208ENST00000507247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -0
RNF4-208ENST00000507247 LMAN2LQ9H0V9 348 aa15.03■□□□□ -0
RNF4-208ENST00000507247 TTYH1Q9H313 450 aaPredicted RBP15.03■□□□□ -0
RNF4-208ENST00000507247 CRISPLD1Q9H336 500 aa15.03■□□□□ -0
RNF4-208ENST00000507247 KRT82Q9NSB4 513 aa15.03■□□□□ -0
RNF4-208ENST00000507247 SEPT11Q9NVA2 429 aaKnown RBP15.03■□□□□ -0
RNF4-208ENST00000507247 ABI2Q9NYB9 513 aaPredicted RBP15.03■□□□□ -0
RNF4-208ENST00000507247 ADAMTS1Q9UHI8 967 aa15.03■□□□□ -0
RNF4-208ENST00000507247 CYTH4Q9UIA0 394 aa15.03■□□□□ -0
RNF4-208ENST00000507247 NENFQ9UMX5 172 aa15.03■□□□□ -0
RNF4-208ENST00000507247 GREB1Q4ZG55 1949 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms