RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 CXCR5P32302 372 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 LIPAP38571 399 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 AVPR1BP47901 424 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 CLCN2P51788 898 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 RPS16P62249 146 aaKnown RBP4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 SEMA5AQ13591 1074 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 CNGA2Q16280 664 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 RGS7BPQ6MZT1 257 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 ZNF783Q6ZMS7 281 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 OR6B3Q8NGW1 331 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 DDX17Q92841 729 aaKnown RBP4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 RFKQ969G6 155 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 FAM136AQ96C01 138 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 PDLIM2Q96JY6 352 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 MESP1Q9BRJ9 268 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 CXorf36Q9H7Y0 433 aa4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
CDC42SE2-210ENST00000506929 TBC1D4O60343 1298 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 LMNAP02545 664 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 HRGP04196 525 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 CSF1RP07333 972 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 NR2F6P10588 404 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 IL1R1P14778 569 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 JUPP14923 745 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 ZKSCAN1P17029 563 aaPredicted RBP4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 PXNP49023 591 aaPredicted RBP4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 RARRES1P49788 294 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 NANOS3P60323 173 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 MYO1EQ12965 1108 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 TBCCQ15814 346 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 PLA1AQ53H76 456 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 PRR16Q569H4 304 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 KAZNQ674X7 775 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 DARS2Q6PI48 645 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 DNAJC10Q8IXB1 793 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 TMEM171Q8WVE6 324 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 APIPQ96GX9 242 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 CRAMP1Q96RY5 1269 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 OSBPL9Q96SU4 736 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 SIK2Q9H0K1 926 aa4.29□□□□□ -1.72
CDC42SE2-210ENST00000506929 KAT6AQ92794 2004 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 GOLIM4O00461 696 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 MPPED1O15442 326 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 TRIAP1O43715 76 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 ATXN1LP0C7T5 689 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 SLC5A1P13866 664 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 KCNA3P22001 575 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 VIPR2P41587 438 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 PIK3CBP42338 1070 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 ITGA8P53708 1063 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 LOXL3P58215 753 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 LMBRD2Q68DH5 695 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 PPP4R4Q6NUP7 873 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 SRGAP1Q7Z6B7 1085 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 ATG4AQ8WYN0 398 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 FKBP10Q96AY3 582 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 C8orf48Q96LL4 319 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 PTDSS2Q9BVG9 487 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 STK31Q9BXU1 1019 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 KLK15Q9H2R5 256 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 R3HDMLQ9H3Y0 253 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 PRDM11Q9NQV5 511 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 DDX21Q9NR30 783 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 ASB6Q9NWX5 421 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 LRIT1Q9P2V4 623 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 ADAM21Q9UKJ8 722 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 CORO2BQ9UQ03 480 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 DMTF1Q9Y222 760 aa4.28□□□□□ -1.72
CDC42SE2-210ENST00000506929 H7C4K7 107 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 PYCARD-AS1I3L0S3 204 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 MYO1CO00159 1063 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 C1QL1O75973 258 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 NUDT3O95989 172 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 THP07101 528 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 MYL3P08590 195 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 FAM193AP78312 1265 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 PTPRRQ15256 657 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 COBLL1Q53SF7 1204 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 DEPDC1Q5TB30 811 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 ARHGEF25Q86VW2 580 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 FAM98AQ8NCA5 519 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 BPIFB1Q8TDL5 484 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 GLG1Q92896 1179 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 PGBD1Q96JS3 809 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 ZNF287Q9HBT7 754 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 GBA2Q9HCG7 927 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 KIAA1586Q9HCI6 787 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 KLC4Q9NSK0 619 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 ZNHIT2Q9UHR6 403 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 OGDHLQ9ULD0 1010 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 SNX14Q9Y5W7 946 aa4.27□□□□□ -1.73
CDC42SE2-210ENST00000506929 LRRC3CA6NJW4 275 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms