RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 LPAL2Q16609 132 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 DUOXA2Q1HG44 320 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 RSPO4Q2I0M5 234 aaPredicted RBP26.47■■□□□ 1.83
HERC4-212ENST00000505760 SOWAHAQ2M3V2 549 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 PRR23BQ6ZRT6 265 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 MON1AQ86VX9 555 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 SYNPOQ8N3V7 929 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 OR5B17Q8NGF7 314 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 FAM83CQ9BQN1 747 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 KIAA1586Q9HCI6 787 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 PTPRJQ12913 1337 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 GABRDO14764 452 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 EIF3DO15371 548 aaKnown RBP eCLIP26.46■■□□□ 1.83
HERC4-212ENST00000505760 HCRTO43612 131 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 CUTAO60888 179 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 PAPSS2O95340 614 aaPredicted RBP26.46■■□□□ 1.83
HERC4-212ENST00000505760 YEATS4O95619 227 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 RUNX3Q13761 415 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 CCDC142Q17RM4 750 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 CFAP221Q4G0U5 840 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 CC2D1AQ6P1N0 951 aaPredicted RBP26.46■■□□□ 1.83
HERC4-212ENST00000505760 DPH6Q7L8W6 267 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 SCN4BQ8IWT1 228 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 TRMT2BQ96GJ1 504 aaKnown RBP26.46■■□□□ 1.83
HERC4-212ENST00000505760 FUBP3Q96I24 572 aaKnown RBP eCLIP26.46■■□□□ 1.83
HERC4-212ENST00000505760 EBF3Q9H4W6 596 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 DLL3Q9NYJ7 618 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 USP18Q9UMW8 372 aa26.46■■□□□ 1.83
HERC4-212ENST00000505760 CHURC1-FNTBB4DL54 471 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 NOL4O94818 638 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 HOXD13P35453 343 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 FNTBP49356 437 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 FAM26FQ5R3K3 315 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 FOXD4L5Q5VV16 416 aaPredicted RBP26.45■■□□□ 1.82
HERC4-212ENST00000505760 HEATR6Q6AI08 1181 aaKnown RBP26.45■■□□□ 1.82
HERC4-212ENST00000505760 TRIM68Q6AZZ1 485 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 LAIR1Q6GTX8 287 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 FOXD4L4Q8WXT5 416 aaPredicted RBP26.45■■□□□ 1.82
HERC4-212ENST00000505760 TRPC7Q9HCX4 862 aa26.45■■□□□ 1.82
HERC4-212ENST00000505760 K7ESF4 209 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 DMWDQ09019 674 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 SIM2Q14190 667 aaPredicted RBP26.44■■□□□ 1.82
HERC4-212ENST00000505760 C4orf50Q6ZRC1 276 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 WDR49Q8IV35 697 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 MYRFLQ96LU7 910 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 SYT15Q9BQS2 421 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 HPS4Q9NQG7 708 aa26.44■■□□□ 1.82
HERC4-212ENST00000505760 SDHBP21912 280 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 AMPD2Q01433 879 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 LMNB2Q03252 620 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 GRSF1Q12849 480 aaKnown RBP eCLIP26.43■■□□□ 1.82
HERC4-212ENST00000505760 ZNF268Q14587 947 aaPredicted RBP26.43■■□□□ 1.82
HERC4-212ENST00000505760 SNRNP35Q16560 246 aaKnown RBP26.43■■□□□ 1.82
HERC4-212ENST00000505760 CNNM4Q6P4Q7 775 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 SHC4Q6S5L8 630 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 EPM2AIP1Q7L775 607 aaPredicted RBP26.43■■□□□ 1.82
HERC4-212ENST00000505760 LONP2Q86WA8 852 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 FSIP1Q8NA03 581 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 RDH13Q8NBN7 331 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 TTC16Q8NEE8 873 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 ZNF507Q8TCN5 953 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 MMS19Q96T76 1030 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 C7orf25Q9BPX7 421 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 MAGEC2Q9UBF1 373 aaPredicted RBP26.43■■□□□ 1.82
HERC4-212ENST00000505760 CDH9Q9ULB4 789 aa26.43■■□□□ 1.82
HERC4-212ENST00000505760 ATG2BQ96BY7 2078 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 PRR5-ARHGAP8B1AHC4 643 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 ATP2C2O75185 946 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 TADA3O75528 432 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 CKMP06732 381 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 DLATP10515 647 aaKnown RBP26.42■■□□□ 1.82
HERC4-212ENST00000505760 LMO2P25791 158 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 CNR2P34972 360 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 MAGEA11P43364 429 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 PSMC1P62191 440 aaKnown RBP26.42■■□□□ 1.82
HERC4-212ENST00000505760 ARHGAP8P85298 464 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 FOXD4L6Q3SYB3 417 aaPredicted RBP26.42■■□□□ 1.82
HERC4-212ENST00000505760 FAM171BQ6P995 826 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 FOXD4L3Q6VB84 417 aaPredicted RBP26.42■■□□□ 1.82
HERC4-212ENST00000505760 KBTBD7Q8WVZ9 684 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 FNBP1Q96RU3 617 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 MAGEF1Q9HAY2 307 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 AGPAT3Q9NRZ7 376 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 C2orf42Q9NWW7 574 aa26.42■■□□□ 1.82
HERC4-212ENST00000505760 GREB1Q4ZG55 1949 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 ANAPC1Q9H1A4 1944 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 RALGAPA1Q6GYQ0 2036 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 TRAV19A0A0A6YYK7 116 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 OTOL1A6NHN0 477 aaPredicted RBP26.41■■□□□ 1.82
HERC4-212ENST00000505760 POLR2DO15514 142 aaKnown RBP26.41■■□□□ 1.82
HERC4-212ENST00000505760 HRO43593 1189 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 HSP90AA1P07900 732 aaKnown RBP26.41■■□□□ 1.82
HERC4-212ENST00000505760 USP17L7P0C7H9 530 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 ARSAP15289 507 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 TNNI1P19237 187 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 CYP2J2P51589 502 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 FAM160A1Q05DH4 1040 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 PDGFRLQ15198 375 aa26.41■■□□□ 1.82
HERC4-212ENST00000505760 MAPRE1Q15691 268 aaKnown RBP26.41■■□□□ 1.82
HERC4-212ENST00000505760 TMEM196Q5HYL7 178 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms