RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 AK8Q96MA6 479 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 PYM1Q9BRP8 204 aaKnown RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 SMG9Q9H0W8 520 aaKnown RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 PARVGQ9HBI0 331 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 DPP3Q9NY33 737 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 ABI2Q9NYB9 513 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 LIMCH1Q9UPQ0 1083 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 NUP210Q8TEM1 1887 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-210ENST00000505589 FAM208BQ5VWN6 2430 aa10.67□□□□□ -0.7
NEDD9-210ENST00000505589 OTOL1A6NHN0 477 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 GIPC1O14908 333 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 DCLK1O15075 740 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 MEFVO15553 781 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 TRAK2O60296 914 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 HUS1O60921 280 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 FAM13AO94988 1023 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 IL18RAPO95256 599 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 LDHAP00338 332 aaKnown RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 HMGA1P17096 107 aaKnown RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 HDCP19113 662 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 EIF2DP41214 584 aaKnown RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 TNFSF9P41273 254 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 LHX1P48742 406 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 SLC12A3P55017 1021 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 IRX4P78413 519 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 RAD51AP2Q09MP3 1159 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 KCNB1Q14721 858 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 CRY1Q16526 586 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 TRIM61Q5EBN2 209 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 ARL6IP4Q66PJ3 421 aaKnown RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 ADALQ6DHV7 355 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 TCEAL6Q6IPX3 200 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 SLC23A3Q6PIS1 610 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 WHAMMQ8TF30 809 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 ZCCHC14Q8WYQ9 949 aaKnown RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 PIGKQ92643 395 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 GATA6Q92908 595 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 TCEAL3Q969E4 200 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 CHFRQ96EP1 664 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 FUBP3Q96I24 572 aaKnown RBP eCLIP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 FBRSL1Q9HCM7 1045 aaKnown RBP10.66□□□□□ -0.7
NEDD9-210ENST00000505589 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 WASF3Q9UPY6 502 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 CCL26Q9Y258 94 aa10.66□□□□□ -0.7
NEDD9-210ENST00000505589 FAM221BA6H8Z2 402 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 AP5Z1O43299 807 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 KRT18P05783 430 aaKnown RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 SYPP08247 313 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 NFICP08651 508 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 ARSAP15289 507 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 PCSK1P29120 753 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 GTF2BQ00403 316 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 GFPT1Q06210 699 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 SLC14A1Q13336 389 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 MAPRE1Q15691 268 aaKnown RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 ZNF423Q2M1K9 1284 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 EML3Q32P44 896 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 WSCD1Q658N2 575 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 ANO7Q6IWH7 933 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 SLC36A4Q6YBV0 504 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 C4orf50Q6ZRC1 276 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 DPH6Q7L8W6 267 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 TRMT11Q7Z4G4 463 aaKnown RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 TMEM150AQ86TG1 271 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 SPATA2LQ8IUW3 424 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 TTC9BQ8N6N2 239 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 USP33Q8TEY7 942 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 HAPLN2Q9GZV7 340 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 TRPC7Q9HCX4 862 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 AGO2Q9UKV8 859 aaKnown RBP10.65□□□□□ -0.7
NEDD9-210ENST00000505589 MMP17Q9ULZ9 603 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 SLC6A14Q9UN76 642 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 CHD6Q8TD26 2715 aa10.65□□□□□ -0.7
NEDD9-210ENST00000505589 USP24Q9UPU5 2620 aa10.65□□□□□ -0.71
NEDD9-210ENST00000505589 A0A0A0MRY4 1105 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 K7ENM7 598 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 OPHN1O60890 802 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 DTNBO60941 627 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 NOL4O94818 638 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 APODP05090 189 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 NMT1P30419 496 aaKnown RBP10.64□□□□□ -0.71
NEDD9-210ENST00000505589 UBA7P41226 1012 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 TNFRSF4P43489 277 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 GUCY2FP51841 1108 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 RING1Q06587 406 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 ZNF77Q15935 545 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 CFAP221Q4G0U5 840 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 C2orf27AQ580R0 203 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 VSTM1Q6UX27 236 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 LRRTM3Q86VH5 581 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 DDX42Q86XP3 938 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEDD9-210ENST00000505589 EFCAB13Q8IY85 973 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 DEFB124Q8NES8 71 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 PNKPQ96T60 521 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 PI4K2AQ9BTU6 479 aa10.64□□□□□ -0.71
NEDD9-210ENST00000505589 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-210ENST00000505589 TRPM5Q9NZQ8 1165 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms