RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 H3BRJ5 948 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 CLDN3O15551 220 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 EDIL3O43854 480 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 DLDP09622 509 aaKnown RBP13.92□□□□□ -0.18
LETM1-203ENST00000505551 RRM1P23921 792 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 ADRA1DP25100 572 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 HOXD13P35453 343 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 CASP5P51878 434 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 KIF22Q14807 665 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 RASA2Q15283 850 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 TRIP13Q15645 432 aaPredicted RBP13.92□□□□□ -0.18
LETM1-203ENST00000505551 MYLK3Q32MK0 819 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 MAP7D1Q3KQU3 841 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 C1orf146Q5VVC0 180 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 NEK10Q6ZWH5 1172 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 SH3BP5LQ7L8J4 393 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 PATL1Q86TB9 770 aaKnown RBP13.92□□□□□ -0.18
LETM1-203ENST00000505551 NOP9Q86U38 636 aaKnown RBP13.92□□□□□ -0.18
LETM1-203ENST00000505551 CROCCP3Q8IVE0 287 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 LARGE2Q8N3Y3 721 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 GRK7Q8WTQ7 553 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
LETM1-203ENST00000505551 MTBPQ96DY7 904 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 SENP6Q9GZR1 1112 aaPredicted RBP13.92□□□□□ -0.18
LETM1-203ENST00000505551 CHST7Q9NS84 486 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 ZNHIT2Q9UHR6 403 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 NEU2Q9Y3R4 380 aa13.92□□□□□ -0.18
LETM1-203ENST00000505551 DDX60LQ5H9U9 1706 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ARHGAP10A1A4S6 786 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 FAM170AA1A519 330 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 PDXKO00764 312 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 SLC26A4O43511 780 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 TDP2O95551 362 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ADCY8P40145 1251 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 CPA2P48052 419 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 GPC5P78333 572 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 KNOP1Q1ED39 458 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 DNAL1Q4LDG9 190 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 CYP4F22Q6NT55 531 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 MARVELD2Q8N4S9 558 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 BBOF1Q8ND07 529 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ANKK1Q8NFD2 765 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 MAK16Q9BXY0 300 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 FOXP3Q9BZS1 431 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 SEPT11Q9NVA2 429 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 PPP1R1BQ9UD71 204 aaPredicted RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 NR2E3Q9Y5X4 410 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 A0A1W2PPM1 405 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 GSTTP1A0A1W2PQM5 241 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 SH3PXD2BA1X283 911 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 TCP10L2B9ZVM9 353 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ATMINO43313 823 aaPredicted RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 TRMUO75648 421 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 ERFP50548 548 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 HHIPL2Q6UWX4 724 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 NLRX1Q86UT6 975 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 TRIM50Q86XT4 487 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 PEX5LQ8IYB4 626 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 REXO1Q8N1G1 1221 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 HNRNPABQ99729 332 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 MRPS26Q9BYN8 205 aaKnown RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 VPS11Q9H270 941 aa13.91□□□□□ -0.18
LETM1-203ENST00000505551 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 KIAA1522Q9P206 1035 aaPredicted RBP13.91□□□□□ -0.18
LETM1-203ENST00000505551 ADAMTSL1Q8N6G6 1762 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 MYH11P35749 1972 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 CCDC160A6NGH7 325 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 POTECB2RU33 542 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 POC1B-GALNT4F8VUJ3 575 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 PPP1R11O60927 126 aaPredicted RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 FTLP02792 175 aaPredicted RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 HALP42357 657 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 TNNI2P48788 182 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 ARL4CP56559 192 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 PPIDQ08752 370 aaKnown RBP13.9□□□□□ -0.18
LETM1-203ENST00000505551 LPCAT4Q643R3 524 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 RIN3Q8TB24 985 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 DEPTORQ8TB45 409 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 RBM15Q96T37 977 aaKnown RBP eCLIP13.9□□□□□ -0.184e-9■■■□□ 16.5
LETM1-203ENST00000505551 AGPAT1Q99943 283 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 MANSC1Q9H8J5 431 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 JMJD4Q9H9V9 463 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 AASDHPPTQ9NRN7 309 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 ARMCX1Q9P291 453 aa13.9□□□□□ -0.18
LETM1-203ENST00000505551 CBFA2T3O75081 653 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms