RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 SNX17Q15036 470 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ALKAL1Q6UXT8 129 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ZDHHC14Q8IZN3 488 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 C1orf54Q8WWF1 131 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 TTC25Q96NG3 672 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 CCDC77Q9BR77 488 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 SDCBP2Q9H190 292 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 PLEKHA4Q9H4M7 779 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 GDAP2Q9NXN4 497 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ALDH1A1P00352 501 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 MYL3P08590 195 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ZNF143P52747 638 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-205ENST00000505458 RPL7AP62424 266 aaKnown RBP11.93□□□□□ -0.5
NFKB1-205ENST00000505458 TAZQ16635 292 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 MAP7D3Q8IWC1 876 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 C7orf31Q8N865 590 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-205ENST00000505458 RSAD1Q9HA92 442 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 SLC38A7Q9NVC3 462 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ANAPC5Q9UJX4 755 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 IGF2BP3O00425 579 aaKnown RBP eCLIP11.93□□□□□ -0.5
NFKB1-205ENST00000505458 LIASO43766 372 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-205ENST00000505458 AGTP01019 485 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 ADCY8P40145 1251 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 RAP1GAPP47736 663 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 TFDP2Q14188 446 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 FSCN1Q16658 493 aaKnown RBP11.93□□□□□ -0.5
NFKB1-205ENST00000505458 FAM47CQ5HY64 1035 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 BBS12Q6ZW61 710 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 CHST12Q9NRB3 414 aa11.93□□□□□ -0.5
NFKB1-205ENST00000505458 TCRBV7S2A1N4TA0A589 114 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 EIF3HO15372 352 aaKnown RBP eCLIP11.92□□□□□ -0.5
NFKB1-205ENST00000505458 TOMM70O94826 608 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 GPD1P21695 349 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 VCPP55072 806 aaKnown RBP11.92□□□□□ -0.5
NFKB1-205ENST00000505458 CST9Q5W186 159 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 RHBDF2Q6PJF5 856 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 HHIPL1Q96JK4 782 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 TNIP3Q96KP6 325 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 PCDH9Q9HC56 1237 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 PTPN22Q9Y2R2 807 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 LRRD1A4D1F6 860 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 TAF6P49848 677 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 GYS2P54840 703 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 FCGRTP55899 365 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 ZNF252P-AS1Q0IIN9 211 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 TAOK1Q7L7X3 1001 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 GSTA5Q7RTV2 222 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 RPAINQ86UA6 219 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 TEKT4Q8WW24 435 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
NFKB1-205ENST00000505458 CHST7Q9NS84 486 aa11.92□□□□□ -0.5
NFKB1-205ENST00000505458 PIN4Q9Y237 131 aaKnown RBP11.92□□□□□ -0.5
NFKB1-205ENST00000505458 MEFVO15553 781 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 ABHD2P08910 425 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CDKN2BP42772 138 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 SLC8A3P57103 927 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 SLC25A11Q02978 314 aaKnown RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 PDK2Q15119 407 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 FBXO47Q5MNV8 452 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 FAM43BQ6ZT52 329 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CPNE8Q86YQ8 564 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 RIBC1Q8N443 379 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 TOP6BLQ8N6T0 577 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 SPATA18Q8TC71 538 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 ZBTB10Q96DT7 871 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CPXM1Q96SM3 734 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 OSMRQ99650 979 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 METTL5Q9NRN9 209 aaKnown RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 TSPAN16Q9UKR8 245 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 NEU2Q9Y3R4 380 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 GOLGA8SH3BPF8 625 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 TCEA3O75764 348 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 RECQL4O94761 1208 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 BCAT1P54687 386 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 GJA9P57773 515 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 PPP2R2AP63151 447 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 MORF4L2Q15014 288 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 BOLA3Q53S33 107 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 FAM102AQ5T9C2 384 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 SLC4A5Q9BY07 1137 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 SHOC2Q9UQ13 582 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 RIPK2O43353 540 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 RFC1P35251 1148 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-205ENST00000505458 GJC1P36383 396 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CDH8P55286 799 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 GNGT1P63211 74 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 GOLGA7BQ2TAP0 167 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 CYP4A22Q5TCH4 519 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 MFSD7Q6UXD7 560 aa11.91□□□□□ -0.5
NFKB1-205ENST00000505458 C4orf22Q6V702 233 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms