RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
RFC1-210ENST00000505077 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
RFC1-210ENST00000505077 DOCK6Q96HP0 2047 aa10.9□□□□□ -0.66
RFC1-210ENST00000505077 REV3LO60673 3130 aa10.9□□□□□ -0.66
RFC1-210ENST00000505077 O00370 1275 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 C2CD2LO14523 706 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 TEX28O15482 410 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 THAP12O43422 761 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 NRDCO43847 1150 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 ABLIM3O94929 683 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CXCL14O95715 111 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CNPP09543 421 aaKnown RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 PDGFRBP09619 1106 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 SETSIPP0DME0 302 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CD19P15391 556 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 POU3F3P20264 500 aaPredicted RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 FECHP22830 423 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 MAGEA11P43364 429 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 BCAT1P54687 386 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 ERVFC1P60507 584 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CDR2Q01850 454 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 KLHL30Q0D2K2 578 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CNGA2Q16280 664 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 PLPP4Q5VZY2 271 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 LCLAT1Q6UWP7 414 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 VSTM1Q6UX27 236 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 IRF2BP2Q7Z5L9 587 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 SLC47A2Q86VL8 602 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 SPATA2LQ8IUW3 424 aaPredicted RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 SPC24Q8NBT2 197 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 ZNF461Q8TAF7 563 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 MICAL1Q8TDZ2 1067 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 HDAC7Q8WUI4 952 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CPLX3Q8WVH0 158 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 MYLPFQ96A32 169 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 CYFIP2Q96F07 1278 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 PCED1BQ96HM7 432 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 HNRNPABQ99729 332 aaKnown RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 CLSTN3Q9BQT9 956 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 DPEP3Q9H4B8 488 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 HESX1Q9UBX0 185 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 AFF4Q9UHB7 1163 aaKnown RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 NOCTQ9UK39 431 aaKnown RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.89□□□□□ -0.67
RFC1-210ENST00000505077 CEP83Q9Y592 693 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 PCDHB5Q9Y5E4 795 aa10.89□□□□□ -0.67
RFC1-210ENST00000505077 NUP210Q8TEM1 1887 aaPredicted RBP10.89□□□□□ -0.67
RFC1-210ENST00000505077 SSU72P8A0A1W2PR75 194 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 MYBPHLA2RUH7 354 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 MTMR11A4FU01 709 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 RNF225M0QZC1 329 aaPredicted RBP10.88□□□□□ -0.67
RFC1-210ENST00000505077 GLUD1P00367 558 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 FAM200BP0CF97 657 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 PNMA6AP0CW24 399 aaPredicted RBP10.88□□□□□ -0.67
RFC1-210ENST00000505077 ATF2P15336 505 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 OR1D2P34982 312 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 CA8P35219 290 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 ADKP55263 362 aaKnown RBP10.88□□□□□ -0.67
RFC1-210ENST00000505077 PLD1Q13393 1074 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 SLC39A12Q504Y0 691 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 TDRD12Q587J7 1177 aaKnown RBP10.88□□□□□ -0.67
RFC1-210ENST00000505077 HGSNATQ68CP4 663 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 FAM35AQ86V20 835 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 FUKQ8N0W3 1084 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 C12orf29Q8N999 325 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 ANKRD52Q8NB46 1076 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 SLC2A14Q8TDB8 520 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 ZNF606Q8WXB4 792 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 NOX5Q96PH1 765 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 KLHL5Q96PQ7 755 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 ZNF518BQ9C0D4 1074 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 CERS4Q9HA82 394 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 PNPLA8Q9NP80 782 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 DMAP1Q9NPF5 467 aaPredicted RBP10.88□□□□□ -0.67
RFC1-210ENST00000505077 CYLDQ9NQC7 956 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 KRT82Q9NSB4 513 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 GTF3C4Q9UKN8 822 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
RFC1-210ENST00000505077 NOTCH4Q99466 2003 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 EPOPA6NHQ4 379 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 HIDE1A8MVS5 230 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 TRIM66O15016 1216 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 HCRTO43612 131 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 ATP2C2O75185 946 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 CCDC130P13994 396 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 NPR3P17342 541 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
RFC1-210ENST00000505077 KLRC2P26717 231 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
RFC1-210ENST00000505077 TUFMP49411 452 aaKnown RBP10.87□□□□□ -0.67
RFC1-210ENST00000505077 CLCN4P51793 760 aa10.87□□□□□ -0.67
RFC1-210ENST00000505077 SNX16P57768 344 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms