RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CENPPQ6IPU0 288 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 DDX53Q86TM3 631 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 NSL1Q96IY1 281 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 BATF3Q9NR55 127 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 A0A0A6YYK5 440 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 AIM2O14862 343 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SLC2A3P11169 496 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 RALBP11234 206 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 CYP11B1P15538 503 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 ZNF157P51786 506 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 PTRHD1Q6GMV3 140 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 FAM95CA0A1B0GW59 222 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 PRRG1O14668 218 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 HARS2P49590 506 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 PDK2Q15119 407 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SLITRK1Q96PX8 696 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 C5orf58C9J3I9 102 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 CFAP99D6REC4 459 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 UBE2Q2LH0YL09 131 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 NPTX2P47972 431 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SERPINB10P48595 397 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 MROH9Q5TGP6 573 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 LRRC8BQ6P9F7 803 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 CHSY1Q86X52 802 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 ACTRT1Q8TDG2 376 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 WHRNQ9P202 907 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 VPS9D1Q9Y2B5 631 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SPDYE5A6NIY4 337 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 H0Y626 953 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 STK25O00506 426 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 TRIM16O95361 564 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SUPT20HL2P0C7V6 817 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 EPHB2P29323 1055 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 ATP6V1E1P36543 226 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SPDYE7PQ495Y7 208 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 AASDHQ4L235 1098 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 ADNPQ9H2P0 1102 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SLC39A10Q9ULF5 831 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 SYNDIG1LA6NDD5 238 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 EIF4E1BA6NMX2 242 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 ODC1P11926 461 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 KLC1Q07866 573 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 CDKAL1Q5VV42 579 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 MPZL3Q6UWV2 235 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 PRPF39Q86UA1 669 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 ACER1Q8TDN7 264 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 CGRRF1Q99675 332 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 FAM32AQ9Y421 112 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 SEC24DO94855 1032 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 DPEP1P16444 411 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 OR1G1P47890 313 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 TWF1Q12792 350 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 PNKPQ96T60 521 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 NUDT12Q9BQG2 462 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 PRDM5Q9NQX1 630 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 TRPC5OSA6NMA1 111 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 HNRNPRO43390 633 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 CLASP2O75122 1294 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 ARP10275 920 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 BLOC1S6Q9UL45 172 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 KCNA4P22459 653 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 FAM83EQ2M2I3 478 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 TFDP3Q5H9I0 405 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 PKN3Q6P5Z2 889 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 RFWD2Q8NHY2 731 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 GFM2Q969S9 779 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 SH3BP1Q9Y3L3 701 aa17.19■□□□□ 0.34
PCDHA1-203ENST00000504120 DAB2P98082 770 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 TEX9Q8N6V9 391 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 ATP6V0D2Q8N8Y2 350 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 ARMC2Q8NEN0 867 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 NR1H4Q96RI1 486 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 POLLQ9UGP5 575 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 CAPN6Q9Y6Q1 641 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 C17orf102A2RUQ5 167 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 CASP4P49662 377 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 GEMP55040 296 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 ZNF720Q7Z2F6 126 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 MTIF3Q9H2K0 278 aaKnown RBP17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 M0QYT0 321 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 MMP14P50281 582 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 FBXW4P57775 412 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 KCNK10P57789 538 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 CLEC4FQ8N1N0 589 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 CBWD1Q9BRT8 395 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 WDCPQ9H6R7 721 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 RIOX1Q9H6W3 641 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 TMX2Q9Y320 296 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 RARGP13631 454 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 ERFP50548 548 aa17.18■□□□□ 0.34
PCDHA1-203ENST00000504120 MCL1Q07820 350 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms