RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 PGBD3Q8N328 593 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 C4orf32Q8N8J7 132 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 MDGA1Q8NFP4 955 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 SPPL2BQ8TCT7 592 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 ATP2A3Q93084 1043 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 SLC22A12Q96S37 553 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 LINC00597Q9H2U6 94 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 ZDHHC4Q9NPG8 344 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 TMEM74BQ9NUR3 256 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 TMLHEQ9NVH6 421 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 BCCIPQ9P287 314 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC171-209ENST00000498725 HSFX1Q9UBD0 423 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 NOL7Q9UMY1 257 aaKnown RBP9.85□□□□□ -0.83
CCDC171-209ENST00000498725 NEUROG3Q9Y4Z2 214 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 PCDHB5Q9Y5E4 795 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 MYOFQ9NZM1 2061 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 PI4KAP42356 2102 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 WDFY3Q8IZQ1 3526 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 TAF4O00268 1085 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 SCAMP3O14828 347 aaKnown RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 HNRNPDLO14979 420 aaKnown RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 EPB41L2O43491 1005 aaKnown RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 CYP11A1P05108 521 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 USP17L7P0C7H9 530 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 DDX6P26196 483 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 PTGER3P43115 390 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 ACOT2P49753 483 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 ATXN3P54252 364 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 FAM193AP78312 1265 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 NR1H3Q13133 447 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 ORC2Q13416 577 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 PDIA5Q14554 519 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 EML3Q32P44 896 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 TMEM92Q6UXU6 159 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 LPCAT2Q7L5N7 544 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 SFTPA1Q8IWL2 248 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 EFCAB13Q8IY85 973 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 DCP1BQ8IZD4 617 aaKnown RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 ARL14EPQ8N8R7 260 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 IGSF22Q8N9C0 903 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 SPRYD3Q8NCJ5 442 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 OR2I1PQ8NGU4 316 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 USP33Q8TEY7 942 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 OSCP1Q8WVF1 389 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 NTPCRQ9BSD7 190 aaKnown RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 MSTO1Q9BUK6 570 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 RAB34Q9BZG1 259 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 C17orf75Q9HAS0 396 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 MBD1Q9UIS9 605 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-209ENST00000498725 MSRB2Q9Y3D2 182 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 PCDHB6Q9Y5E3 794 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 ZFYVE26Q68DK2 2539 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 PLXND1Q9Y4D7 1925 aa9.84□□□□□ -0.83
CCDC171-209ENST00000498725 DSPP15924 2871 aaKnown RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 TRAV19A0A0A6YYK7 116 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 C2orf78A6NCI8 922 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 K7ENM7 598 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 K7EQS6 105 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 PIRO00625 290 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 TADA3O75528 432 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 KLF8O95600 359 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 CSH1P0DML2 217 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 CSH2P0DML3 217 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 HNRNPLP14866 589 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ACAT1P24752 427 aaKnown RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 CYP2F1P24903 491 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 GUCY2CP25092 1073 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 TAF6P49848 677 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 NEK4P51957 841 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 FAM160A1Q05DH4 1040 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ST3GAL1Q11201 340 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 LMAN2Q12907 356 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ZNF77Q15935 545 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 IL17AQ16552 155 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 COL28A1Q2UY09 1125 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 C11orf74Q86VG3 221 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 CCDC83Q8IWF9 413 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 SCN4BQ8IWT1 228 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 HDDC3Q8N4P3 179 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ALLCQ8N6M5 410 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 SH3RF2Q8TEC5 729 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 C2orf15Q8WU43 125 aaKnown RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 HMGB4Q8WW32 186 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ERLEC1Q96DZ1 483 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 SPACA7Q96KW9 195 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 CNOT6LQ96LI5 555 aaKnown RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 MMTAG2Q9BU76 263 aaKnown RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 FOXP1Q9H334 677 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ZHX3Q9H4I2 956 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 DPP3Q9NY33 737 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ZMYM5Q9UJ78 669 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 DSEQ9UL01 958 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 MMP17Q9ULZ9 603 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
CCDC171-209ENST00000498725 ANO9A1A5B4 782 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 TISP43B9A030 160 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 ANKRD63C9JTQ0 380 aa9.82□□□□□ -0.84
CCDC171-209ENST00000498725 FAM189A1O60320 539 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms